Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.45■□□□□ 0.86
SNX18Q96RF0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX18Q96RF0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX18Q96RF0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX18Q96RF0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX18Q96RF0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SNX18Q96RF0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.44■□□□□ 0.86
SNX18Q96RF0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX18Q96RF0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX18Q96RF0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.44■□□□□ 0.86
SNX18Q96RF0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SNX18Q96RF0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX18Q96RF0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SNX18Q96RF0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX18Q96RF0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX18Q96RF0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX18Q96RF0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX18Q96RF0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX18Q96RF0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.42■□□□□ 0.86
SNX18Q96RF0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX18Q96RF0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX18Q96RF0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX18Q96RF0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX18Q96RF0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 EP400NL-214ENST00000641289 2402 ntBASIC20.41■□□□□ 0.86
SNX18Q96RF0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX18Q96RF0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX18Q96RF0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX18Q96RF0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SNX18Q96RF0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX18Q96RF0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SNX18Q96RF0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX18Q96RF0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX18Q96RF0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SNX18Q96RF0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX18Q96RF0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX18Q96RF0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX18Q96RF0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX18Q96RF0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX18Q96RF0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX18Q96RF0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX18Q96RF0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX18Q96RF0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNX18Q96RF0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX18Q96RF0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.39■□□□□ 0.86
SNX18Q96RF0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX18Q96RF0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX18Q96RF0 AC131274.2-201ENST00000580697 1507 ntBASIC20.39■□□□□ 0.85
SNX18Q96RF0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SNX18Q96RF0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.39■□□□□ 0.85
SNX18Q96RF0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX18Q96RF0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX18Q96RF0 AL451085.2-201ENST00000605085 799 ntBASIC20.39■□□□□ 0.85
SNX18Q96RF0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SNX18Q96RF0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX18Q96RF0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX18Q96RF0 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX18Q96RF0 AC137767.1-201ENST00000602918 1920 ntBASIC20.38■□□□□ 0.85
SNX18Q96RF0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX18Q96RF0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX18Q96RF0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX18Q96RF0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SNX18Q96RF0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX18Q96RF0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX18Q96RF0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SNX18Q96RF0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX18Q96RF0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX18Q96RF0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SNX18Q96RF0 YBX1P4-201ENST00000392794 808 ntBASIC20.37■□□□□ 0.85
SNX18Q96RF0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX18Q96RF0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.37■□□□□ 0.85
SNX18Q96RF0 AL035685.1-201ENST00000636663 812 ntBASIC20.37■□□□□ 0.85
SNX18Q96RF0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms