Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC239859.2-201ENST00000444165 318 ntBASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 MIR4787-201ENST00000607364 84 ntBASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TTC9CQ8N5M4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TTC9CQ8N5M4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TTC9CQ8N5M4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 AC005703.6-201ENST00000623265 1329 ntBASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TTC9CQ8N5M4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TTC9CQ8N5M4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TTC9CQ8N5M4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TTC9CQ8N5M4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 MTDHP2-201ENST00000601468 714 ntBASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TTC9CQ8N5M4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms