Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 AC096631.2-201ENST00000436136 790 ntBASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 AC241377.3-202ENST00000626088 1088 ntBASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 AC241585.3-202ENST00000628937 1088 ntBASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 AC245100.8-202ENST00000629247 1058 ntBASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LIMS2Q7Z4I7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LIMS2Q7Z4I7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
LIMS2Q7Z4I7 UNC93B3-201ENST00000308076 687 ntBASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 DUX4L19-201ENST00000557448 1267 ntBASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LIMS2Q7Z4I7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24■■□□□ 1.43
LIMS2Q7Z4I7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 AC006455.2-201ENST00000429931 906 ntBASIC24■■□□□ 1.43
LIMS2Q7Z4I7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 AC133561.4-201ENST00000566112 224 ntBASIC24■■□□□ 1.43
LIMS2Q7Z4I7 AC092171.4-201ENST00000609130 632 ntBASIC24■■□□□ 1.43
LIMS2Q7Z4I7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24■■□□□ 1.43
LIMS2Q7Z4I7 FP325331.1-202ENST00000623531 1380 ntBASIC24■■□□□ 1.43
LIMS2Q7Z4I7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 MIR638-201ENST00000385237 100 ntBASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 AC106739.1-201ENST00000617035 715 ntBASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
LIMS2Q7Z4I7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 AC093323.1-202ENST00000635031 2045 ntBASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 SERBP1P1-201ENST00000396021 1160 ntBASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
LIMS2Q7Z4I7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
LIMS2Q7Z4I7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LIMS2Q7Z4I7 AL138724.1-201ENST00000606771 1088 ntBASIC23.97■■□□□ 1.43
LIMS2Q7Z4I7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 AC144652.1-201ENST00000609974 1624 ntBASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 DUX4L4-201ENST00000566884 1269 ntBASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LIMS2Q7Z4I7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
LIMS2Q7Z4I7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
LIMS2Q7Z4I7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.95■■□□□ 1.42
LIMS2Q7Z4I7 AL136162.1-201ENST00000607711 1078 ntBASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms