Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VMA21Q3ZAQ7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 AC092068.2-201ENST00000590491 1708 ntBASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VMA21Q3ZAQ7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 AC137630.3-201ENST00000607245 391 ntBASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VMA21Q3ZAQ7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.17■□□□□ 0.5
VMA21Q3ZAQ7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 AC012676.1-201ENST00000574705 1949 ntBASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.16■□□□□ 0.5
VMA21Q3ZAQ7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 BX664725.1-201ENST00000438252 379 ntBASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.15■□□□□ 0.5
VMA21Q3ZAQ7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VMA21Q3ZAQ7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VMA21Q3ZAQ7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 SNX5-217ENST00000606557 1087 ntBASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VMA21Q3ZAQ7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VMA21Q3ZAQ7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VMA21Q3ZAQ7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VMA21Q3ZAQ7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VMA21Q3ZAQ7 AC068473.5-201ENST00000616428 2072 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms