Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
AP3S2P59780 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.39■□□□□ 0.69
AP3S2P59780 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP3S2P59780 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.39■□□□□ 0.69
AP3S2P59780 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.38■□□□□ 0.69
AP3S2P59780 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.38■□□□□ 0.69
AP3S2P59780 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
AP3S2P59780 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.37■□□□□ 0.69
AP3S2P59780 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.37■□□□□ 0.69
AP3S2P59780 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
AP3S2P59780 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S2P59780 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.37■□□□□ 0.69
AP3S2P59780 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S2P59780 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S2P59780 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
AP3S2P59780 MIR3960-201ENST00000583311 91 ntBASIC19.37■□□□□ 0.69
AP3S2P59780 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
AP3S2P59780 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3S2P59780 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.36■□□□□ 0.69
AP3S2P59780 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S2P59780 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S2P59780 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S2P59780 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3S2P59780 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S2P59780 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3S2P59780 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
AP3S2P59780 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3S2P59780 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
AP3S2P59780 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.36■□□□□ 0.69
AP3S2P59780 AL137060.1-201ENST00000618151 2648 ntBASIC19.36■□□□□ 0.69
AP3S2P59780 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S2P59780 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
AP3S2P59780 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.35■□□□□ 0.69
AP3S2P59780 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S2P59780 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
AP3S2P59780 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.35■□□□□ 0.69
AP3S2P59780 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S2P59780 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
AP3S2P59780 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S2P59780 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.35■□□□□ 0.69
AP3S2P59780 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S2P59780 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
AP3S2P59780 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S2P59780 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S2P59780 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.34■□□□□ 0.69
AP3S2P59780 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3S2P59780 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S2P59780 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3S2P59780 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.34■□□□□ 0.69
AP3S2P59780 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
AP3S2P59780 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S2P59780 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S2P59780 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
AP3S2P59780 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3S2P59780 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
AP3S2P59780 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
AP3S2P59780 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
AP3S2P59780 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S2P59780 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.33■□□□□ 0.68
AP3S2P59780 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S2P59780 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
AP3S2P59780 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
AP3S2P59780 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.33■□□□□ 0.68
AP3S2P59780 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3S2P59780 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
AP3S2P59780 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
AP3S2P59780 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.32■□□□□ 0.68
AP3S2P59780 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.32■□□□□ 0.68
AP3S2P59780 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
AP3S2P59780 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.32■□□□□ 0.68
AP3S2P59780 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.32■□□□□ 0.68
AP3S2P59780 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
AP3S2P59780 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S2P59780 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
AP3S2P59780 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.31■□□□□ 0.68
AP3S2P59780 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.31■□□□□ 0.68
AP3S2P59780 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.31■□□□□ 0.68
AP3S2P59780 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
AP3S2P59780 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.3■□□□□ 0.68
AP3S2P59780 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
AP3S2P59780 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
AP3S2P59780 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
AP3S2P59780 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms