Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
USP6P35125 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.95■■■□□ 2.55
USP6P35125 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
USP6P35125 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.95■■■□□ 2.55
USP6P35125 AL031602.1-201ENST00000633169 911 ntBASIC30.95■■■□□ 2.54
USP6P35125 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.95■■■□□ 2.54
USP6P35125 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
USP6P35125 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.94■■■□□ 2.54
USP6P35125 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.94■■■□□ 2.54
USP6P35125 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP6P35125 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC30.94■■■□□ 2.54
USP6P35125 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.94■■■□□ 2.54
USP6P35125 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.94■■■□□ 2.54
USP6P35125 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP6P35125 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.93■■■□□ 2.54
USP6P35125 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.93■■■□□ 2.54
USP6P35125 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC30.93■■■□□ 2.54
USP6P35125 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
USP6P35125 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.93■■■□□ 2.54
USP6P35125 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
USP6P35125 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP6P35125 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
USP6P35125 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP6P35125 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP6P35125 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.92■■■□□ 2.54
USP6P35125 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP6P35125 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.92■■■□□ 2.54
USP6P35125 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP6P35125 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
USP6P35125 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.91■■■□□ 2.54
USP6P35125 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
USP6P35125 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
USP6P35125 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP6P35125 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP6P35125 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP6P35125 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.9■■■□□ 2.54
USP6P35125 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.9■■■□□ 2.54
USP6P35125 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP6P35125 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP6P35125 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP6P35125 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
USP6P35125 TSPY26P-201ENST00000476365 1326 ntBASIC30.89■■■□□ 2.54
USP6P35125 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.89■■■□□ 2.54
USP6P35125 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP6P35125 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
USP6P35125 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.89■■■□□ 2.53
USP6P35125 YBX1P1-201ENST00000445822 960 ntBASIC30.89■■■□□ 2.53
USP6P35125 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.89■■■□□ 2.53
USP6P35125 AC126544.1-201ENST00000580842 1059 ntBASIC30.89■■■□□ 2.53
USP6P35125 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
USP6P35125 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC30.88■■■□□ 2.53
USP6P35125 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP6P35125 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC30.88■■■□□ 2.53
USP6P35125 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP6P35125 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP6P35125 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP6P35125 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
USP6P35125 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.87■■■□□ 2.53
USP6P35125 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP6P35125 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP6P35125 AC022211.4-201ENST00000625094 2161 ntBASIC30.87■■■□□ 2.53
USP6P35125 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
USP6P35125 IGHV3-19-201ENST00000521488 291 ntBASIC30.86■■■□□ 2.53
USP6P35125 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.86■■■□□ 2.53
USP6P35125 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
USP6P35125 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC30.85■■■□□ 2.53
USP6P35125 AC027612.3-201ENST00000413684 1047 ntBASIC30.85■■■□□ 2.53
USP6P35125 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
USP6P35125 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
USP6P35125 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
USP6P35125 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
USP6P35125 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.84■■■□□ 2.53
USP6P35125 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
USP6P35125 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
USP6P35125 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
USP6P35125 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
USP6P35125 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
USP6P35125 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.83■■■□□ 2.53
USP6P35125 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.83■■■□□ 2.53
USP6P35125 AC034268.1-201ENST00000441047 882 ntBASIC30.83■■■□□ 2.53
USP6P35125 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
USP6P35125 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC30.83■■■□□ 2.53
USP6P35125 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.83■■■□□ 2.53
USP6P35125 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
USP6P35125 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
USP6P35125 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
USP6P35125 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC30.82■■■□□ 2.52
USP6P35125 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
USP6P35125 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.82■■■□□ 2.52
USP6P35125 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.82■■■□□ 2.52
USP6P35125 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
USP6P35125 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
USP6P35125 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
USP6P35125 KRT18P5-201ENST00000436075 1291 ntBASIC30.81■■■□□ 2.52
USP6P35125 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.81■■■□□ 2.52
USP6P35125 AL499627.2-201ENST00000606283 725 ntBASIC30.81■■■□□ 2.52
USP6P35125 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
USP6P35125 AP003733.4-201ENST00000623785 1697 ntBASIC30.81■■■□□ 2.52
USP6P35125 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.81■■■□□ 2.52
USP6P35125 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms