Protein–RNA interactions for Protein: P0C7I0

USP17L8, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L8P0C7I0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC27.43■■□□□ 1.98
USP17L8P0C7I0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
USP17L8P0C7I0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.42■■□□□ 1.98
USP17L8P0C7I0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
USP17L8P0C7I0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
USP17L8P0C7I0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
USP17L8P0C7I0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
USP17L8P0C7I0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.41■■□□□ 1.98
USP17L8P0C7I0 AC126544.1-201ENST00000580842 1059 ntBASIC27.41■■□□□ 1.98
USP17L8P0C7I0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.41■■□□□ 1.98
USP17L8P0C7I0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 AC022517.1-201ENST00000592429 346 ntBASIC27.4■■□□□ 1.98
USP17L8P0C7I0 RARRES2P11-201ENST00000635158 484 ntBASIC27.4■■□□□ 1.98
USP17L8P0C7I0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
USP17L8P0C7I0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC27.39■■□□□ 1.98
USP17L8P0C7I0 AC090192.1-201ENST00000517740 490 ntBASIC27.39■■□□□ 1.98
USP17L8P0C7I0 pRNA.6-201ENST00000610482 90 ntBASIC27.39■■□□□ 1.98
USP17L8P0C7I0 pRNA.5-201ENST00000612139 90 ntBASIC27.39■■□□□ 1.98
USP17L8P0C7I0 IKBKGP1-201ENST00000612193 1073 ntBASIC27.39■■□□□ 1.98
USP17L8P0C7I0 pRNA.11-201ENST00000618423 90 ntBASIC27.39■■□□□ 1.98
USP17L8P0C7I0 pRNA.13-201ENST00000619112 90 ntBASIC27.39■■□□□ 1.98
USP17L8P0C7I0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
USP17L8P0C7I0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 YBX1P1-201ENST00000445822 960 ntBASIC27.38■■□□□ 1.97
USP17L8P0C7I0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
USP17L8P0C7I0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L8P0C7I0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.36■■□□□ 1.97
USP17L8P0C7I0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.36■■□□□ 1.97
USP17L8P0C7I0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L8P0C7I0 AL031602.1-201ENST00000633169 911 ntBASIC27.36■■□□□ 1.97
USP17L8P0C7I0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 KRT18P5-201ENST00000436075 1291 ntBASIC27.35■■□□□ 1.97
USP17L8P0C7I0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 TSPY26P-201ENST00000476365 1326 ntBASIC27.35■■□□□ 1.97
USP17L8P0C7I0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.35■■□□□ 1.97
USP17L8P0C7I0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 AC135731.1-201ENST00000569415 2548 ntBASIC27.34■■□□□ 1.97
USP17L8P0C7I0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 AC020928.2-201ENST00000588717 2197 ntBASIC27.34■■□□□ 1.97
USP17L8P0C7I0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.34■■□□□ 1.97
USP17L8P0C7I0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.33■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms