Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.05■□□□□ 0.64
SPDEFO95238 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.05■□□□□ 0.64
SPDEFO95238 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPDEFO95238 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.04■□□□□ 0.64
SPDEFO95238 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.04■□□□□ 0.64
SPDEFO95238 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
SPDEFO95238 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPDEFO95238 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPDEFO95238 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPDEFO95238 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPDEFO95238 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPDEFO95238 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPDEFO95238 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.03■□□□□ 0.64
SPDEFO95238 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.03■□□□□ 0.64
SPDEFO95238 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SPDEFO95238 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPDEFO95238 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPDEFO95238 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPDEFO95238 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.02■□□□□ 0.64
SPDEFO95238 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SPDEFO95238 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SPDEFO95238 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPDEFO95238 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SPDEFO95238 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.02■□□□□ 0.64
SPDEFO95238 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPDEFO95238 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPDEFO95238 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPDEFO95238 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.01■□□□□ 0.63
SPDEFO95238 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPDEFO95238 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPDEFO95238 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPDEFO95238 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SPDEFO95238 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SPDEFO95238 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19■□□□□ 0.63
SPDEFO95238 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SPDEFO95238 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SPDEFO95238 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPDEFO95238 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.99■□□□□ 0.63
SPDEFO95238 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.99■□□□□ 0.63
SPDEFO95238 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SPDEFO95238 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDEFO95238 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SPDEFO95238 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SPDEFO95238 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SPDEFO95238 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPDEFO95238 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDEFO95238 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDEFO95238 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.98■□□□□ 0.63
SPDEFO95238 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDEFO95238 AL592293.1-201ENST00000502889 1188 ntBASIC18.98■□□□□ 0.63
SPDEFO95238 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDEFO95238 AC018755.3-202ENST00000596210 929 ntBASIC18.98■□□□□ 0.63
SPDEFO95238 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDEFO95238 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDEFO95238 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SPDEFO95238 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDEFO95238 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDEFO95238 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SPDEFO95238 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDEFO95238 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SPDEFO95238 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 DUSP8P3-201ENST00000399571 1760 ntBASIC18.97■□□□□ 0.63
SPDEFO95238 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPDEFO95238 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.97■□□□□ 0.63
SPDEFO95238 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SPDEFO95238 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.97■□□□□ 0.63
SPDEFO95238 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SPDEFO95238 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDEFO95238 ECEL1P1-201ENST00000373592 1742 ntBASIC18.97■□□□□ 0.63
SPDEFO95238 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.97■□□□□ 0.63
SPDEFO95238 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDEFO95238 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms