Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RHBDD3Q9Y3P4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 KRT18P24-201ENST00000344739 1156 ntBASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 THA1P-201ENST00000590384 1145 ntBASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RHBDD3Q9Y3P4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RHBDD3Q9Y3P4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.77■□□□□ 0.75
RHBDD3Q9Y3P4 KRT8P33-201ENST00000508125 1423 ntBASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 AC103834.1-201ENST00000520383 144 ntBASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 MIR4508-201ENST00000584178 70 ntBASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 ANOS2P-203ENST00000472227 1816 ntBASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.76■□□□□ 0.75
RHBDD3Q9Y3P4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.75■□□□□ 0.75
RHBDD3Q9Y3P4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 AL022069.1-201ENST00000568025 1636 ntBASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RHBDD3Q9Y3P4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 MIR4281-201ENST00000580852 62 ntBASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 AL161729.1-201ENST00000604104 1402 ntBASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RHBDD3Q9Y3P4 DUSP8P3-201ENST00000399571 1760 ntBASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 YBX1P4-201ENST00000392794 808 ntBASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 AC092068.2-201ENST00000590491 1708 ntBASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
RHBDD3Q9Y3P4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms