Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 AC241377.3-202ENST00000626088 1088 ntBASIC23.8■■□□□ 1.4
LRRC3Q9BY71 AC241585.3-202ENST00000628937 1088 ntBASIC23.8■■□□□ 1.4
LRRC3Q9BY71 AC245100.8-202ENST00000629247 1058 ntBASIC23.8■■□□□ 1.4
LRRC3Q9BY71 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.8■■□□□ 1.4
LRRC3Q9BY71 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LRRC3Q9BY71 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC3Q9BY71 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC3Q9BY71 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.79■■□□□ 1.4
LRRC3Q9BY71 AC022211.4-201ENST00000625094 2161 ntBASIC23.79■■□□□ 1.4
LRRC3Q9BY71 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC3Q9BY71 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC3Q9BY71 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC3Q9BY71 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 CA15P2-201ENST00000611168 834 ntBASIC23.77■■□□□ 1.4
LRRC3Q9BY71 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 RASA4CP-201ENST00000424092 1398 ntBASIC23.77■■□□□ 1.4
LRRC3Q9BY71 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.77■■□□□ 1.4
LRRC3Q9BY71 ALDH1A3-203ENST00000557963 1670 ntBASIC23.76■■□□□ 1.39
LRRC3Q9BY71 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC3Q9BY71 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC3Q9BY71 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC3Q9BY71 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC3Q9BY71 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC3Q9BY71 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC3Q9BY71 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 AC136469.2-201ENST00000623944 1028 ntBASIC23.75■■□□□ 1.39
LRRC3Q9BY71 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC3Q9BY71 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 MIR3181-201ENST00000578512 73 ntBASIC23.74■■□□□ 1.39
LRRC3Q9BY71 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC3Q9BY71 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC3Q9BY71 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC3Q9BY71 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.73■■□□□ 1.39
LRRC3Q9BY71 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
LRRC3Q9BY71 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRC3Q9BY71 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 AC027682.1-201ENST00000562846 899 ntBASIC23.72■■□□□ 1.39
LRRC3Q9BY71 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 AC009086.3-201ENST00000623486 1008 ntBASIC23.72■■□□□ 1.39
LRRC3Q9BY71 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 AP003733.4-201ENST00000623785 1697 ntBASIC23.72■■□□□ 1.39
LRRC3Q9BY71 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC3Q9BY71 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 AC008764.7-201ENST00000593779 1081 ntBASIC23.71■■□□□ 1.39
LRRC3Q9BY71 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC3Q9BY71 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms