Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TMEFF1Q8IYR6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 DUSP8P4-201ENST00000399538 1761 ntBASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.65■■□□□ 1.22
TMEFF1Q8IYR6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 AC034268.1-201ENST00000441047 882 ntBASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 AC126544.1-201ENST00000580842 1059 ntBASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 IKBKGP1-201ENST00000612193 1073 ntBASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TMEFF1Q8IYR6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TMEFF1Q8IYR6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 AC090192.1-201ENST00000517740 490 ntBASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.62■■□□□ 1.21
TMEFF1Q8IYR6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 AC022517.1-201ENST00000592429 346 ntBASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 pRNA.6-201ENST00000610482 90 ntBASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 pRNA.5-201ENST00000612139 90 ntBASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 pRNA.11-201ENST00000618423 90 ntBASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 pRNA.13-201ENST00000619112 90 ntBASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 RARRES2P11-201ENST00000635158 484 ntBASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEFF1Q8IYR6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
TMEFF1Q8IYR6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 AL031602.1-201ENST00000633169 911 ntBASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
TMEFF1Q8IYR6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 TSPY26P-201ENST00000476365 1326 ntBASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEFF1Q8IYR6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
TMEFF1Q8IYR6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TMEFF1Q8IYR6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
TMEFF1Q8IYR6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 KRT18P5-201ENST00000436075 1291 ntBASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.57■■□□□ 1.2
TMEFF1Q8IYR6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms