Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 AL022069.1-201ENST00000568025 1636 ntBASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 SNX5-217ENST00000606557 1087 ntBASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC35.73■■■■□ 3.31
PPARGC1BQ86YN6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
PPARGC1BQ86YN6 AC079834.2-201ENST00000609776 1949 ntBASIC35.72■■■■□ 3.31
PPARGC1BQ86YN6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC35.72■■■■□ 3.31
PPARGC1BQ86YN6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
PPARGC1BQ86YN6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC35.72■■■■□ 3.31
PPARGC1BQ86YN6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC35.71■■■■□ 3.31
PPARGC1BQ86YN6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC35.71■■■■□ 3.31
PPARGC1BQ86YN6 C9orf163-202ENST00000624034 2573 ntBASIC35.71■■■■□ 3.31
PPARGC1BQ86YN6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
PPARGC1BQ86YN6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
PPARGC1BQ86YN6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
PPARGC1BQ86YN6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
PPARGC1BQ86YN6 UNC93B8-201ENST00000511903 705 ntBASIC35.7■■■■□ 3.31
PPARGC1BQ86YN6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
PPARGC1BQ86YN6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 KRT125P-201ENST00000546827 989 ntBASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 AC092028.1-203ENST00000608262 953 ntBASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC35.69■■■■□ 3.3
PPARGC1BQ86YN6 AC141586.4-201ENST00000624558 1573 ntBASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
PPARGC1BQ86YN6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 HES6-204ENST00000409182 863 ntTSL 2 BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 Z92544.1-202ENST00000571933 1220 ntBASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
PPARGC1BQ86YN6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 AC004448.1-201ENST00000458332 883 ntBASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC35.66■■■■□ 3.3
PPARGC1BQ86YN6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
PPARGC1BQ86YN6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC35.65■■■■□ 3.3
PPARGC1BQ86YN6 GUSBP5-201ENST00000418136 578 ntBASIC35.65■■■■□ 3.3
PPARGC1BQ86YN6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC35.65■■■■□ 3.3
PPARGC1BQ86YN6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC35.65■■■■□ 3.3
PPARGC1BQ86YN6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC35.64■■■■□ 3.3
PPARGC1BQ86YN6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
PPARGC1BQ86YN6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC35.63■■■■□ 3.29
PPARGC1BQ86YN6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC35.63■■■■□ 3.29
PPARGC1BQ86YN6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC35.63■■■■□ 3.29
PPARGC1BQ86YN6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC35.63■■■■□ 3.29
PPARGC1BQ86YN6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC35.62■■■■□ 3.29
PPARGC1BQ86YN6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
PPARGC1BQ86YN6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
PPARGC1BQ86YN6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
PPARGC1BQ86YN6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC35.6■■■■□ 3.29
PPARGC1BQ86YN6 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
PPARGC1BQ86YN6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC35.6■■■■□ 3.29
PPARGC1BQ86YN6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
PPARGC1BQ86YN6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms