Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.9■□□□□ 0.3
CMC4P56277 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.9■□□□□ 0.3
CMC4P56277 AC131212.1-201ENST00000613771 668 ntBASIC16.9■□□□□ 0.3
CMC4P56277 AL117332.1-201ENST00000622628 974 ntBASIC16.9■□□□□ 0.3
CMC4P56277 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.9■□□□□ 0.3
CMC4P56277 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMC4P56277 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CMC4P56277 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CMC4P56277 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMC4P56277 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMC4P56277 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMC4P56277 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.89■□□□□ 0.29
CMC4P56277 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMC4P56277 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CMC4P56277 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.89■□□□□ 0.29
CMC4P56277 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.89■□□□□ 0.29
CMC4P56277 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.89■□□□□ 0.29
CMC4P56277 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.89■□□□□ 0.29
CMC4P56277 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CMC4P56277 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.89■□□□□ 0.29
CMC4P56277 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.89■□□□□ 0.29
CMC4P56277 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CMC4P56277 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMC4P56277 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CMC4P56277 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.88■□□□□ 0.29
CMC4P56277 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CMC4P56277 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CMC4P56277 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.88■□□□□ 0.29
CMC4P56277 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.88■□□□□ 0.29
CMC4P56277 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CMC4P56277 AC135731.1-201ENST00000569415 2548 ntBASIC16.88■□□□□ 0.29
CMC4P56277 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CMC4P56277 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMC4P56277 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CMC4P56277 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CMC4P56277 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMC4P56277 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMC4P56277 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 AC092171.4-201ENST00000609130 632 ntBASIC16.87■□□□□ 0.29
CMC4P56277 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMC4P56277 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CMC4P56277 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.87■□□□□ 0.29
CMC4P56277 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CMC4P56277 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMC4P56277 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMC4P56277 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CMC4P56277 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CMC4P56277 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CMC4P56277 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.86■□□□□ 0.29
CMC4P56277 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.86■□□□□ 0.29
CMC4P56277 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.86■□□□□ 0.29
CMC4P56277 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.86■□□□□ 0.29
CMC4P56277 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMC4P56277 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CMC4P56277 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC16.86■□□□□ 0.29
CMC4P56277 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.86■□□□□ 0.29
CMC4P56277 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.85■□□□□ 0.29
CMC4P56277 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CMC4P56277 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.85■□□□□ 0.29
CMC4P56277 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMC4P56277 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.85■□□□□ 0.29
CMC4P56277 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMC4P56277 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CMC4P56277 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CMC4P56277 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.84■□□□□ 0.29
CMC4P56277 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.84■□□□□ 0.29
CMC4P56277 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.84■□□□□ 0.29
CMC4P56277 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CMC4P56277 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CMC4P56277 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CMC4P56277 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMC4P56277 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMC4P56277 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMC4P56277 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMC4P56277 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CMC4P56277 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.83■□□□□ 0.28
CMC4P56277 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.83■□□□□ 0.28
CMC4P56277 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CMC4P56277 AC008406.3-201ENST00000620001 1374 ntBASIC16.83■□□□□ 0.28
CMC4P56277 AC241377.3-202ENST00000626088 1088 ntBASIC16.83■□□□□ 0.28
CMC4P56277 AC241585.3-202ENST00000628937 1088 ntBASIC16.83■□□□□ 0.28
CMC4P56277 AC245100.8-202ENST00000629247 1058 ntBASIC16.83■□□□□ 0.28
CMC4P56277 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CMC4P56277 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms