Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.76■□□□□ 0.75
CCL2P13500 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.76■□□□□ 0.75
CCL2P13500 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.76■□□□□ 0.75
CCL2P13500 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCL2P13500 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCL2P13500 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CCL2P13500 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL2P13500 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.75■□□□□ 0.75
CCL2P13500 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.75■□□□□ 0.75
CCL2P13500 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL2P13500 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCL2P13500 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCL2P13500 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCL2P13500 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL2P13500 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL2P13500 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.74■□□□□ 0.75
CCL2P13500 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL2P13500 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.74■□□□□ 0.75
CCL2P13500 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL2P13500 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCL2P13500 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCL2P13500 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL2P13500 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL2P13500 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL2P13500 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCL2P13500 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCL2P13500 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.73■□□□□ 0.75
CCL2P13500 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.73■□□□□ 0.75
CCL2P13500 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCL2P13500 AC005703.6-201ENST00000623265 1329 ntBASIC19.73■□□□□ 0.75
CCL2P13500 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL2P13500 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL2P13500 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.72■□□□□ 0.75
CCL2P13500 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL2P13500 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL2P13500 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL2P13500 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL2P13500 MIR6724-1-201ENST00000616420 92 ntBASIC19.72■□□□□ 0.75
CCL2P13500 MIR6724-2-201ENST00000616483 92 ntBASIC19.72■□□□□ 0.75
CCL2P13500 MIR6724-4-201ENST00000617390 92 ntBASIC19.72■□□□□ 0.75
CCL2P13500 MIR6724-3-201ENST00000622482 92 ntBASIC19.72■□□□□ 0.75
CCL2P13500 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL2P13500 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.72■□□□□ 0.75
CCL2P13500 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCL2P13500 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCL2P13500 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCL2P13500 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.71■□□□□ 0.75
CCL2P13500 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.71■□□□□ 0.75
CCL2P13500 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCL2P13500 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCL2P13500 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCL2P13500 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCL2P13500 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCL2P13500 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCL2P13500 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
CCL2P13500 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL2P13500 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCL2P13500 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCL2P13500 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCL2P13500 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCL2P13500 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
CCL2P13500 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL2P13500 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCL2P13500 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCL2P13500 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.69■□□□□ 0.74
CCL2P13500 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.69■□□□□ 0.74
CCL2P13500 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
CCL2P13500 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL2P13500 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.68■□□□□ 0.74
CCL2P13500 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCL2P13500 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCL2P13500 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.68■□□□□ 0.74
CCL2P13500 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
CCL2P13500 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms