Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.56■□□□□ 0.72
SFTPBP07988 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.56■□□□□ 0.72
SFTPBP07988 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SFTPBP07988 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SFTPBP07988 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.55■□□□□ 0.72
SFTPBP07988 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.55■□□□□ 0.72
SFTPBP07988 DUSP8P5-201ENST00000422884 1815 ntBASIC19.55■□□□□ 0.72
SFTPBP07988 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SFTPBP07988 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SFTPBP07988 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SFTPBP07988 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SFTPBP07988 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SFTPBP07988 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SFTPBP07988 AL035685.1-201ENST00000636663 812 ntBASIC19.54■□□□□ 0.72
SFTPBP07988 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SFTPBP07988 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SFTPBP07988 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTPBP07988 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SFTPBP07988 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTPBP07988 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SFTPBP07988 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTPBP07988 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SFTPBP07988 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
SFTPBP07988 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SFTPBP07988 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SFTPBP07988 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SFTPBP07988 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.52■□□□□ 0.72
SFTPBP07988 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SFTPBP07988 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
SFTPBP07988 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SFTPBP07988 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.52■□□□□ 0.72
SFTPBP07988 AL031848.2-201ENST00000607670 837 ntBASIC19.52■□□□□ 0.72
SFTPBP07988 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SFTPBP07988 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SFTPBP07988 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.51■□□□□ 0.71
SFTPBP07988 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.51■□□□□ 0.71
SFTPBP07988 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SFTPBP07988 AC009299.2-201ENST00000482477 511 ntBASIC19.51■□□□□ 0.71
SFTPBP07988 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SFTPBP07988 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
SFTPBP07988 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SFTPBP07988 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SFTPBP07988 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SFTPBP07988 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SFTPBP07988 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.51■□□□□ 0.71
SFTPBP07988 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.5■□□□□ 0.71
SFTPBP07988 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.5■□□□□ 0.71
SFTPBP07988 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.5■□□□□ 0.71
SFTPBP07988 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.5■□□□□ 0.71
SFTPBP07988 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SFTPBP07988 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SFTPBP07988 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SFTPBP07988 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.49■□□□□ 0.71
SFTPBP07988 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 AC011551.1-201ENST00000614101 683 ntBASIC19.49■□□□□ 0.71
SFTPBP07988 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SFTPBP07988 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SFTPBP07988 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SFTPBP07988 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
SFTPBP07988 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.49■□□□□ 0.71
SFTPBP07988 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SFTPBP07988 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SFTPBP07988 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms