Protein–RNA interactions for Protein: O75865

TRAPPC6A, Trafficking protein particle complex subunit 6A, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6AO75865 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRAPPC6AO75865 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.63■□□□□ 0.89
TRAPPC6AO75865 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAPPC6AO75865 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAPPC6AO75865 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAPPC6AO75865 LINC01124-201ENST00000409786 2117 ntBASIC20.62■□□□□ 0.89
TRAPPC6AO75865 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
TRAPPC6AO75865 AC096631.2-201ENST00000436136 790 ntBASIC20.62■□□□□ 0.89
TRAPPC6AO75865 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
TRAPPC6AO75865 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAPPC6AO75865 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAPPC6AO75865 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAPPC6AO75865 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAPPC6AO75865 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 AL139246.5-201ENST00000606645 996 ntBASIC20.59■□□□□ 0.89
TRAPPC6AO75865 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAPPC6AO75865 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 AC009102.2-201ENST00000606772 1639 ntBASIC20.58■□□□□ 0.89
TRAPPC6AO75865 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAPPC6AO75865 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAPPC6AO75865 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAPPC6AO75865 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAPPC6AO75865 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAPPC6AO75865 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAPPC6AO75865 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAPPC6AO75865 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAPPC6AO75865 AL139125.2-201ENST00000623134 1869 ntBASIC20.55■□□□□ 0.88
TRAPPC6AO75865 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAPPC6AO75865 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAPPC6AO75865 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAPPC6AO75865 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 AC110285.6-201ENST00000617652 491 ntBASIC20.54■□□□□ 0.88
TRAPPC6AO75865 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.54■□□□□ 0.88
TRAPPC6AO75865 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 UNC93B3-201ENST00000308076 687 ntBASIC20.53■□□□□ 0.88
TRAPPC6AO75865 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 AC141586.4-201ENST00000624558 1573 ntBASIC20.53■□□□□ 0.88
TRAPPC6AO75865 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRAPPC6AO75865 LINC00543-201ENST00000567234 1845 ntBASIC20.53■□□□□ 0.88
TRAPPC6AO75865 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms