Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
UPK1BO75841 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
UPK1BO75841 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
UPK1BO75841 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.87■□□□□ 0.77
UPK1BO75841 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.87■□□□□ 0.77
UPK1BO75841 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.86■□□□□ 0.77
UPK1BO75841 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.86■□□□□ 0.77
UPK1BO75841 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
UPK1BO75841 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 MIR762-201ENST00000390236 83 ntBASIC19.86■□□□□ 0.77
UPK1BO75841 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
UPK1BO75841 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.86■□□□□ 0.77
UPK1BO75841 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
UPK1BO75841 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.86■□□□□ 0.77
UPK1BO75841 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
UPK1BO75841 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
UPK1BO75841 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1BO75841 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1BO75841 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.85■□□□□ 0.77
UPK1BO75841 AC092053.2-201ENST00000640557 1818 ntBASIC19.85■□□□□ 0.77
UPK1BO75841 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UPK1BO75841 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1BO75841 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.85■□□□□ 0.77
UPK1BO75841 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UPK1BO75841 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UPK1BO75841 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.84■□□□□ 0.77
UPK1BO75841 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.84■□□□□ 0.77
UPK1BO75841 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UPK1BO75841 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1BO75841 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UPK1BO75841 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UPK1BO75841 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UPK1BO75841 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.83■□□□□ 0.77
UPK1BO75841 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.83■□□□□ 0.76
UPK1BO75841 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UPK1BO75841 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.82■□□□□ 0.76
UPK1BO75841 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1BO75841 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UPK1BO75841 CAHM-201ENST00000604200 896 ntBASIC19.82■□□□□ 0.76
UPK1BO75841 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1BO75841 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UPK1BO75841 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
UPK1BO75841 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1BO75841 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UPK1BO75841 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.82■□□□□ 0.76
UPK1BO75841 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.81■□□□□ 0.76
UPK1BO75841 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.81■□□□□ 0.76
UPK1BO75841 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UPK1BO75841 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.81■□□□□ 0.76
UPK1BO75841 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UPK1BO75841 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
UPK1BO75841 AC139530.1-201ENST00000575312 1977 ntBASIC19.81■□□□□ 0.76
UPK1BO75841 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1BO75841 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1BO75841 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1BO75841 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.8■□□□□ 0.76
UPK1BO75841 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.8■□□□□ 0.76
UPK1BO75841 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1BO75841 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.8■□□□□ 0.76
UPK1BO75841 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1BO75841 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.8■□□□□ 0.76
UPK1BO75841 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.8■□□□□ 0.76
UPK1BO75841 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPK1BO75841 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
UPK1BO75841 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UPK1BO75841 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPK1BO75841 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms