Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
NDUFA1O15239 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.48■□□□□ 0.07
NDUFA1O15239 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NDUFA1O15239 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA1O15239 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.47■□□□□ 0.07
NDUFA1O15239 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFA1O15239 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA1O15239 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFA1O15239 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA1O15239 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA1O15239 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NDUFA1O15239 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
NDUFA1O15239 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.47■□□□□ 0.07
NDUFA1O15239 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NDUFA1O15239 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
NDUFA1O15239 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
NDUFA1O15239 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA1O15239 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA1O15239 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFA1O15239 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA1O15239 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.46■□□□□ 0.07
NDUFA1O15239 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.46■□□□□ 0.07
NDUFA1O15239 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.46■□□□□ 0.07
NDUFA1O15239 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA1O15239 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA1O15239 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NDUFA1O15239 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA1O15239 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA1O15239 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA1O15239 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
NDUFA1O15239 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA1O15239 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA1O15239 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NDUFA1O15239 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.45■□□□□ 0.06
NDUFA1O15239 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 GPX1-201ENST00000419349 1106 ntBASIC15.45■□□□□ 0.06
NDUFA1O15239 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.45■□□□□ 0.06
NDUFA1O15239 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NDUFA1O15239 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NDUFA1O15239 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NDUFA1O15239 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NDUFA1O15239 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NDUFA1O15239 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA1O15239 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
NDUFA1O15239 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
NDUFA1O15239 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
NDUFA1O15239 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA1O15239 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.44■□□□□ 0.06
NDUFA1O15239 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFA1O15239 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.44■□□□□ 0.06
NDUFA1O15239 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA1O15239 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
NDUFA1O15239 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA1O15239 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NDUFA1O15239 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NDUFA1O15239 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NDUFA1O15239 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.43■□□□□ 0.06
NDUFA1O15239 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
NDUFA1O15239 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
NDUFA1O15239 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.43■□□□□ 0.06
NDUFA1O15239 RAP2CP1-202ENST00000605179 643 ntBASIC15.43■□□□□ 0.06
NDUFA1O15239 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.43■□□□□ 0.06
NDUFA1O15239 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
NDUFA1O15239 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NDUFA1O15239 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
NDUFA1O15239 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NDUFA1O15239 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.43■□□□□ 0.06
NDUFA1O15239 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NDUFA1O15239 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFA1O15239 MIR4449-201ENST00000578365 66 ntBASIC15.42■□□□□ 0.06
NDUFA1O15239 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 FOXO3B-201ENST00000395675 1928 ntBASIC15.42■□□□□ 0.06
NDUFA1O15239 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NDUFA1O15239 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFA1O15239 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms