Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 MET17YLR303W 1335 nt6.37□□□□□ -1.39
TY1B-HO13535 SDS3YIL084C 984 nt6.36□□□□□ -1.39
TY1B-HO13535 ILV5YLR355C 1188 nt6.36□□□□□ -1.39
TY1B-HO13535 CEX1YOR112W 2286 nt6.36□□□□□ -1.39
TY1B-HO13535 SUM1YDR310C 3189 nt6.36□□□□□ -1.39
TY1B-HO13535 tC(GCA)BtC(GCA)B 72 nt6.36□□□□□ -1.39
TY1B-HO13535 tC(GCA)GtC(GCA)G 72 nt6.36□□□□□ -1.39
TY1B-HO13535 tC(GCA)P1tC(GCA)P1 72 nt6.36□□□□□ -1.39
TY1B-HO13535 tC(GCA)P2tC(GCA)P2 72 nt6.36□□□□□ -1.39
TY1B-HO13535 ZRT1YGL255W 1131 nt6.36□□□□□ -1.39
TY1B-HO13535 YGR127WYGR127W 939 nt6.36□□□□□ -1.39
TY1B-HO13535 MTH1YDR277C 1302 nt6.35□□□□□ -1.39
TY1B-HO13535 VHT1YGR065C 1782 nt6.35□□□□□ -1.39
TY1B-HO13535 YDR193WYDR193W 399 nt6.35□□□□□ -1.39
TY1B-HO13535 AUA1YFL010W-A 285 nt6.35□□□□□ -1.39
TY1B-HO13535 YGL214WYGL214W 486 nt6.35□□□□□ -1.39
TY1B-HO13535 CCZ1YBR131W 2115 nt6.35□□□□□ -1.39
TY1B-HO13535 YER158CYER158C 1722 nt6.34□□□□□ -1.39
TY1B-HO13535 HEK2YBL032W 1146 nt6.34□□□□□ -1.39
TY1B-HO13535 YDR306CYDR306C 1437 nt6.34□□□□□ -1.39
TY1B-HO13535 FAR10YLR238W 1437 nt6.34□□□□□ -1.39
TY1B-HO13535 RDN5-1RDN5-1 121 nt6.34□□□□□ -1.4
TY1B-HO13535 SEC72YLR292C 582 nt6.34□□□□□ -1.4
TY1B-HO13535 RDN5-6RDN5-6 121 nt6.34□□□□□ -1.4
TY1B-HO13535 PGM2YMR105C 1710 nt6.33□□□□□ -1.4
TY1B-HO13535 YDL071CYDL071C 375 nt6.32□□□□□ -1.4
TY1B-HO13535 AHA1YDR214W 1053 nt6.32□□□□□ -1.4
TY1B-HO13535 YGL199CYGL199C 471 nt6.32□□□□□ -1.4
TY1B-HO13535 CTR1YPR124W 1221 nt6.32□□□□□ -1.4
TY1B-HO13535 FMP32YFL046W 624 nt6.31□□□□□ -1.4
TY1B-HO13535 AAD6YFL056C 639 nt6.31□□□□□ -1.4
TY1B-HO13535 YIL152WYIL152W 708 nt6.31□□□□□ -1.4
TY1B-HO13535 HAP1YLR256W 4509 nt6.31□□□□□ -1.4
TY1B-HO13535 ENP1YBR247C 1452 nt6.31□□□□□ -1.4
TY1B-HO13535 RAD4YER162C 2265 nt6.31□□□□□ -1.4
TY1B-HO13535 LSB1YGR136W 726 nt6.31□□□□□ -1.4
TY1B-HO13535 GVP36YIL041W 981 nt6.3□□□□□ -1.4
TY1B-HO13535 ASI2YNL159C 870 nt6.3□□□□□ -1.4
TY1B-HO13535 BUD17YNR027W 954 nt6.3□□□□□ -1.4
TY1B-HO13535 YLR446WYLR446W 1302 nt6.3□□□□□ -1.4
TY1B-HO13535 YBR053CYBR053C 1077 nt6.29□□□□□ -1.4
TY1B-HO13535 ECM33YBR078W 1290 nt6.29□□□□□ -1.4
TY1B-HO13535 TRS120YDR407C 3870 nt6.29□□□□□ -1.4
TY1B-HO13535 IES6YEL044W 501 nt6.29□□□□□ -1.4
TY1B-HO13535 YDC1YPL087W 954 nt6.29□□□□□ -1.4
TY1B-HO13535 RSF2YJR127C 4143 nt6.28□□□□□ -1.4
TY1B-HO13535 CDC48YDL126C 2508 nt6.28□□□□□ -1.4
TY1B-HO13535 PTC1YDL006W 846 nt6.28□□□□□ -1.4
TY1B-HO13535 YER187WYER187W 426 nt6.28□□□□□ -1.4
TY1B-HO13535 MRP4YHL004W 1185 nt6.28□□□□□ -1.4
TY1B-HO13535 ASF2YDL197C 1578 nt6.27□□□□□ -1.41
TY1B-HO13535 FAR8YMR029C 1572 nt6.27□□□□□ -1.41
TY1B-HO13535 RAD52YML032C 1416 nt6.27□□□□□ -1.41
TY1B-HO13535 HIS6YIL020C 786 nt6.27□□□□□ -1.41
TY1B-HO13535 ERP2YAL007C 648 nt6.27□□□□□ -1.41
TY1B-HO13535 YJR112W-AYJR112W-A 330 nt6.27□□□□□ -1.41
TY1B-HO13535 MKK2YPL140C 1521 nt6.27□□□□□ -1.41
TY1B-HO13535 YOS9YDR057W 1629 nt6.26□□□□□ -1.41
TY1B-HO13535 SIR2YDL042C 1689 nt6.26□□□□□ -1.41
TY1B-HO13535 IMA3YIL172C 1770 nt6.26□□□□□ -1.41
TY1B-HO13535 IMA4YJL221C 1770 nt6.26□□□□□ -1.41
TY1B-HO13535 PEP5YMR231W 3090 nt6.26□□□□□ -1.41
TY1B-HO13535 PER1YCR044C 1074 nt6.26□□□□□ -1.41
TY1B-HO13535 TFB3YDR460W 966 nt6.26□□□□□ -1.41
TY1B-HO13535 YIL021C-AYIL021C-A 270 nt6.26□□□□□ -1.41
TY1B-HO13535 SEA4YBL104C 3117 nt6.25□□□□□ -1.41
TY1B-HO13535 BUD13YGL174W 801 nt6.25□□□□□ -1.41
TY1B-HO13535 CDC42YLR229C 576 nt6.25□□□□□ -1.41
TY1B-HO13535 SNT1YCR033W 3681 nt6.25□□□□□ -1.41
TY1B-HO13535 DNF2YDR093W 4839 nt6.24□□□□□ -1.41
TY1B-HO13535 RPS0AYGR214W 759 nt6.23□□□□□ -1.41
TY1B-HO13535 PMT5YDL093W 2232 nt6.23□□□□□ -1.41
TY1B-HO13535 SEC2YNL272C 2280 nt6.23□□□□□ -1.41
TY1B-HO13535 PXA1YPL147W 2613 nt6.22□□□□□ -1.41
TY1B-HO13535 EAR1YMR171C 1653 nt6.22□□□□□ -1.41
TY1B-HO13535 YTA7YGR270W 4140 nt6.22□□□□□ -1.41
TY1B-HO13535 MST1YKL194C 1389 nt6.22□□□□□ -1.41
TY1B-HO13535 TRP1YDR007W 675 nt6.22□□□□□ -1.41
TY1B-HO13535 YKL162C-AYKL162C-A 153 nt6.22□□□□□ -1.41
TY1B-HO13535 MNT2YGL257C 1677 nt6.22□□□□□ -1.41
TY1B-HO13535 PPQ1YPL179W 1650 nt6.22□□□□□ -1.41
TY1B-HO13535 TRF5YNL299W 1929 nt6.21□□□□□ -1.41
TY1B-HO13535 RAD27YKL113C 1149 nt6.21□□□□□ -1.41
TY1B-HO13535 USA1YML029W 2517 nt6.21□□□□□ -1.41
TY1B-HO13535 HFD1YMR110C 1599 nt6.21□□□□□ -1.42
TY1B-HO13535 YJL206CYJL206C 2277 nt6.21□□□□□ -1.42
TY1B-HO13535 HNT2YDR305C 654 nt6.21□□□□□ -1.42
TY1B-HO13535 YDR391CYDR391C 699 nt6.21□□□□□ -1.42
TY1B-HO13535 GPI13YLL031C 3054 nt6.2□□□□□ -1.42
TY1B-HO13535 RNA15YGL044C 891 nt6.2□□□□□ -1.42
TY1B-HO13535 LAS1YKR063C 1509 nt6.2□□□□□ -1.42
TY1B-HO13535 SSH1YBR283C 1473 nt6.2□□□□□ -1.42
TY1B-HO13535 YEL020CYEL020C 1683 nt6.19□□□□□ -1.42
TY1B-HO13535 KRE9YJL174W 831 nt6.19□□□□□ -1.42
TY1B-HO13535 PDR15YDR406W 4590 nt6.19□□□□□ -1.42
TY1B-HO13535 CRT10YOL063C 2874 nt6.19□□□□□ -1.42
TY1B-HO13535 PAL1YDR348C 1500 nt6.19□□□□□ -1.42
TY1B-HO13535 SPC19YDR201W 498 nt6.18□□□□□ -1.42
TY1B-HO13535 YDR230WYDR230W 348 nt6.18□□□□□ -1.42
TY1B-HO13535 PUS7YOR243C 2031 nt6.18□□□□□ -1.42
Retrieved 100 of 7,029 protein–RNA pairs in 54.4 ms