Protein–RNA interactions for Protein: A6NNE9

MARCH11, E3 ubiquitin-protein ligase MARCH11, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH11A6NNE9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MARCH11A6NNE9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MARCH11A6NNE9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 AL117328.2-201ENST00000624617 1940 ntBASIC18.41■□□□□ 0.54
MARCH11A6NNE9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
MARCH11A6NNE9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 AC233723.2-201ENST00000623798 2106 ntBASIC18.4■□□□□ 0.54
MARCH11A6NNE9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MARCH11A6NNE9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 ALDH1A3-203ENST00000557963 1670 ntBASIC18.39■□□□□ 0.53
MARCH11A6NNE9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MARCH11A6NNE9 AC131274.2-201ENST00000580697 1507 ntBASIC18.39■□□□□ 0.53
MARCH11A6NNE9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 AC022616.5-201ENST00000518796 181 ntBASIC18.38■□□□□ 0.53
MARCH11A6NNE9 HSD17B1P1-201ENST00000590052 955 ntBASIC18.38■□□□□ 0.53
MARCH11A6NNE9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.38■□□□□ 0.53
MARCH11A6NNE9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 KRT18P60-201ENST00000312876 1297 ntBASIC18.37■□□□□ 0.53
MARCH11A6NNE9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MARCH11A6NNE9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.36■□□□□ 0.53
MARCH11A6NNE9 AC019171.1-201ENST00000601251 1056 ntBASIC18.36■□□□□ 0.53
MARCH11A6NNE9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 AC139795.1-202ENST00000500444 432 ntBASIC18.35■□□□□ 0.53
MARCH11A6NNE9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MARCH11A6NNE9 C1orf229-201ENST00000623686 2258 ntBASIC18.35■□□□□ 0.53
MARCH11A6NNE9 AL121603.2-201ENST00000557373 2117 ntBASIC18.35■□□□□ 0.53
MARCH11A6NNE9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms