Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC135279.3-201ENST00000610945 1311 ntBASIC22.01■■□□□ 1.11
PCDHGA3Q9Y5H0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA3Q9Y5H0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGA3Q9Y5H0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA3Q9Y5H0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 EDA-201ENST00000338901 1233 ntBASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA3Q9Y5H0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 AC142381.3-201ENST00000568208 1670 ntBASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 AC005703.6-201ENST00000623265 1329 ntBASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA3Q9Y5H0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA3Q9Y5H0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA3Q9Y5H0 ZNRF2P3-201ENST00000424200 374 ntBASIC21.97■■□□□ 1.11
PCDHGA3Q9Y5H0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 DUX4L19-201ENST00000557448 1267 ntBASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 AL355001.2-201ENST00000620617 1191 ntBASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA3Q9Y5H0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PCDHGA3Q9Y5H0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 AC024257.2-201ENST00000549699 147 ntBASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA3Q9Y5H0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 AL139125.2-201ENST00000623134 1869 ntBASIC21.94■■□□□ 1.1
PCDHGA3Q9Y5H0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHGA3Q9Y5H0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA3Q9Y5H0 AC133561.1-201ENST00000568600 2415 ntBASIC21.92■■□□□ 1.1
PCDHGA3Q9Y5H0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGA3Q9Y5H0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA3Q9Y5H0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms