Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 DUX4L5-201ENST00000630834 1275 ntBASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LINC00116Q8NCU8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 YBX1P1-201ENST00000445822 960 ntBASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 AL137784.2-201ENST00000607332 1000 ntBASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 AL022069.1-201ENST00000568025 1636 ntBASIC29.31■■■□□ 2.28
LINC00116Q8NCU8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
LINC00116Q8NCU8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LINC00116Q8NCU8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
LINC00116Q8NCU8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.3■■■□□ 2.28
LINC00116Q8NCU8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
LINC00116Q8NCU8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.3■■■□□ 2.28
LINC00116Q8NCU8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.29■■■□□ 2.28
LINC00116Q8NCU8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.29■■■□□ 2.28
LINC00116Q8NCU8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.29■■■□□ 2.28
LINC00116Q8NCU8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
LINC00116Q8NCU8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.29■■■□□ 2.28
LINC00116Q8NCU8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 MIR6089-201ENST00000616698 64 ntBASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
LINC00116Q8NCU8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
LINC00116Q8NCU8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.27■■■□□ 2.28
LINC00116Q8NCU8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LINC00116Q8NCU8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LINC00116Q8NCU8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.26■■■□□ 2.28
LINC00116Q8NCU8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 AC092803.2-201ENST00000564287 1899 ntBASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LINC00116Q8NCU8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
LINC00116Q8NCU8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
LINC00116Q8NCU8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
LINC00116Q8NCU8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.25■■■□□ 2.27
LINC00116Q8NCU8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
LINC00116Q8NCU8 TSPY26P-201ENST00000476365 1326 ntBASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 AC126544.1-201ENST00000580842 1059 ntBASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
LINC00116Q8NCU8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 pRNA.6-201ENST00000610482 90 ntBASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 pRNA.5-201ENST00000612139 90 ntBASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 pRNA.11-201ENST00000618423 90 ntBASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 pRNA.13-201ENST00000619112 90 ntBASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
LINC00116Q8NCU8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 SLC47A1P1-202ENST00000449666 945 ntBASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
LINC00116Q8NCU8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
LINC00116Q8NCU8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.21■■■□□ 2.27
LINC00116Q8NCU8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.21■■■□□ 2.27
LINC00116Q8NCU8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
LINC00116Q8NCU8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms