Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC71LQ8N9Z2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC71LQ8N9Z2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CCDC71LQ8N9Z2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CCDC71LQ8N9Z2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CCDC71LQ8N9Z2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC71LQ8N9Z2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCDC71LQ8N9Z2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCDC71LQ8N9Z2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 ABHD17AP4-201ENST00000411545 909 ntBASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 AC007029.1-201ENST00000604183 313 ntBASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC71LQ8N9Z2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CCDC71LQ8N9Z2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC71LQ8N9Z2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 EP400NL-214ENST00000641289 2402 ntBASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 RAP2CP1-202ENST00000605179 643 ntBASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 AC127496.7-201ENST00000625110 1798 ntBASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CCDC71LQ8N9Z2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 C1orf229-201ENST00000623686 2258 ntBASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 AC090877.2-201ENST00000558441 1738 ntBASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 AC022413.1-201ENST00000624602 984 ntBASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CCDC71LQ8N9Z2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms