Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AC008687.6-201ENST00000596318 630 ntBASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC32.59■■■□□ 2.81
LTBP4Q8N2S1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
LTBP4Q8N2S1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
LTBP4Q8N2S1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC32.58■■■□□ 2.81
LTBP4Q8N2S1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
LTBP4Q8N2S1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 DBI-210ENST00000542275 757 ntTSL 5 BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 BID-214ENST00000617586 542 ntTSL 5 BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
LTBP4Q8N2S1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
LTBP4Q8N2S1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
LTBP4Q8N2S1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
LTBP4Q8N2S1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC32.55■■■□□ 2.8
LTBP4Q8N2S1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
LTBP4Q8N2S1 AP005435.1-201ENST00000529293 1178 ntBASIC32.55■■■□□ 2.8
LTBP4Q8N2S1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
LTBP4Q8N2S1 WWOX-218ENST00000627394 894 ntTSL 5 BASIC32.55■■■□□ 2.8
LTBP4Q8N2S1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
LTBP4Q8N2S1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC32.54■■■□□ 2.8
LTBP4Q8N2S1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
LTBP4Q8N2S1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC32.54■■■□□ 2.8
LTBP4Q8N2S1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC32.53■■■□□ 2.8
LTBP4Q8N2S1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
LTBP4Q8N2S1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC32.53■■■□□ 2.8
LTBP4Q8N2S1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
LTBP4Q8N2S1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC32.53■■■□□ 2.8
LTBP4Q8N2S1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.53■■■□□ 2.8
LTBP4Q8N2S1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
LTBP4Q8N2S1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
LTBP4Q8N2S1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC32.51■■■□□ 2.8
LTBP4Q8N2S1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC32.51■■■□□ 2.8
LTBP4Q8N2S1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
LTBP4Q8N2S1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.51■■■□□ 2.8
LTBP4Q8N2S1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC32.51■■■□□ 2.79
LTBP4Q8N2S1 GPX1P1-201ENST00000388829 606 ntBASIC32.51■■■□□ 2.79
LTBP4Q8N2S1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC32.51■■■□□ 2.79
LTBP4Q8N2S1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC32.51■■■□□ 2.79
LTBP4Q8N2S1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC32.5■■■□□ 2.79
LTBP4Q8N2S1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
LTBP4Q8N2S1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
LTBP4Q8N2S1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
LTBP4Q8N2S1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
LTBP4Q8N2S1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LTBP4Q8N2S1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
LTBP4Q8N2S1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.47■■■□□ 2.79
LTBP4Q8N2S1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC32.46■■■□□ 2.79
LTBP4Q8N2S1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
LTBP4Q8N2S1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC32.46■■■□□ 2.79
LTBP4Q8N2S1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC32.46■■■□□ 2.79
LTBP4Q8N2S1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC32.46■■■□□ 2.79
LTBP4Q8N2S1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC32.46■■■□□ 2.79
LTBP4Q8N2S1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
LTBP4Q8N2S1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC32.45■■■□□ 2.79
LTBP4Q8N2S1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.78
LTBP4Q8N2S1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 GUSBP6-202ENST00000438529 1198 ntBASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC32.44■■■□□ 2.78
LTBP4Q8N2S1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
LTBP4Q8N2S1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LTBP4Q8N2S1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LTBP4Q8N2S1 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC32.42■■■□□ 2.78
LTBP4Q8N2S1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC32.42■■■□□ 2.78
LTBP4Q8N2S1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
LTBP4Q8N2S1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms