Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
HPS6Q86YV9 LONRF2P2-201ENST00000439212 571 ntBASIC22.35■■□□□ 1.17
HPS6Q86YV9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.35■■□□□ 1.17
HPS6Q86YV9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HPS6Q86YV9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HPS6Q86YV9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.35■■□□□ 1.17
HPS6Q86YV9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.35■■□□□ 1.17
HPS6Q86YV9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HPS6Q86YV9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.35■■□□□ 1.17
HPS6Q86YV9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HPS6Q86YV9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HPS6Q86YV9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
HPS6Q86YV9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS6Q86YV9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.33■■□□□ 1.17
HPS6Q86YV9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.33■■□□□ 1.17
HPS6Q86YV9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
HPS6Q86YV9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.16
HPS6Q86YV9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.33■■□□□ 1.16
HPS6Q86YV9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.33■■□□□ 1.16
HPS6Q86YV9 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HPS6Q86YV9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
HPS6Q86YV9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.32■■□□□ 1.16
HPS6Q86YV9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.32■■□□□ 1.16
HPS6Q86YV9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 EP400NL-214ENST00000641289 2402 ntBASIC22.32■■□□□ 1.16
HPS6Q86YV9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HPS6Q86YV9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HPS6Q86YV9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
HPS6Q86YV9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 AC239859.2-201ENST00000444165 318 ntBASIC22.31■■□□□ 1.16
HPS6Q86YV9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.31■■□□□ 1.16
HPS6Q86YV9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.31■■□□□ 1.16
HPS6Q86YV9 MIR6089-201ENST00000616698 64 ntBASIC22.31■■□□□ 1.16
HPS6Q86YV9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
HPS6Q86YV9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS6Q86YV9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HPS6Q86YV9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HPS6Q86YV9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.3■■□□□ 1.16
HPS6Q86YV9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.3■■□□□ 1.16
HPS6Q86YV9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
HPS6Q86YV9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.3■■□□□ 1.16
HPS6Q86YV9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HPS6Q86YV9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HPS6Q86YV9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
HPS6Q86YV9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HPS6Q86YV9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HPS6Q86YV9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HPS6Q86YV9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HPS6Q86YV9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.29■■□□□ 1.16
HPS6Q86YV9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.29■■□□□ 1.16
HPS6Q86YV9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.29■■□□□ 1.16
HPS6Q86YV9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HPS6Q86YV9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
HPS6Q86YV9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
HPS6Q86YV9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HPS6Q86YV9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.28■■□□□ 1.16
HPS6Q86YV9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HPS6Q86YV9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HPS6Q86YV9 KRT125P-201ENST00000546827 989 ntBASIC22.28■■□□□ 1.16
HPS6Q86YV9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.28■■□□□ 1.16
HPS6Q86YV9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
HPS6Q86YV9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HPS6Q86YV9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.28■■□□□ 1.16
HPS6Q86YV9 LINC00565-201ENST00000562710 2331 ntBASIC22.28■■□□□ 1.16
HPS6Q86YV9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.27■■□□□ 1.16
HPS6Q86YV9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
HPS6Q86YV9 AC233723.2-201ENST00000623798 2106 ntBASIC22.27■■□□□ 1.16
HPS6Q86YV9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HPS6Q86YV9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HPS6Q86YV9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HPS6Q86YV9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
HPS6Q86YV9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.27■■□□□ 1.16
HPS6Q86YV9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
HPS6Q86YV9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HPS6Q86YV9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
HPS6Q86YV9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
HPS6Q86YV9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HPS6Q86YV9 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HPS6Q86YV9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HPS6Q86YV9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
HPS6Q86YV9 BX664725.1-201ENST00000438252 379 ntBASIC22.26■■□□□ 1.15
HPS6Q86YV9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HPS6Q86YV9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms