Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTTNQ86VV8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.01■□□□□ 0.79
RTTNQ86VV8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTTNQ86VV8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RTTNQ86VV8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 GAK-223ENST00000628912 497 ntTSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTTNQ86VV8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20■□□□□ 0.79
RTTNQ86VV8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.99■□□□□ 0.79
RTTNQ86VV8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTTNQ86VV8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.99■□□□□ 0.79
RTTNQ86VV8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.99■□□□□ 0.79
RTTNQ86VV8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTTNQ86VV8 RARRES2P6-201ENST00000567333 442 ntBASIC19.99■□□□□ 0.79
RTTNQ86VV8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTTNQ86VV8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RTTNQ86VV8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RTTNQ86VV8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTTNQ86VV8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTTNQ86VV8 SNX5-217ENST00000606557 1087 ntBASIC19.99■□□□□ 0.79
RTTNQ86VV8 AL139246.5-201ENST00000606645 996 ntBASIC19.99■□□□□ 0.79
RTTNQ86VV8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.99■□□□□ 0.79
RTTNQ86VV8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.98■□□□□ 0.79
RTTNQ86VV8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 AC026271.2-201ENST00000428091 497 ntBASIC19.98■□□□□ 0.79
RTTNQ86VV8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.98■□□□□ 0.79
RTTNQ86VV8 AC110285.6-201ENST00000617652 491 ntBASIC19.98■□□□□ 0.79
RTTNQ86VV8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RTTNQ86VV8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTTNQ86VV8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RTTNQ86VV8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTTNQ86VV8 AC141586.4-201ENST00000624558 1573 ntBASIC19.97■□□□□ 0.79
RTTNQ86VV8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RTTNQ86VV8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.97■□□□□ 0.79
RTTNQ86VV8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.97■□□□□ 0.79
RTTNQ86VV8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RTTNQ86VV8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTTNQ86VV8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.96■□□□□ 0.79
RTTNQ86VV8 AC104564.3-201ENST00000582367 638 ntBASIC19.96■□□□□ 0.79
RTTNQ86VV8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.96■□□□□ 0.79
RTTNQ86VV8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTTNQ86VV8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RTTNQ86VV8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RTTNQ86VV8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTTNQ86VV8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.96■□□□□ 0.79
RTTNQ86VV8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTTNQ86VV8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RTTNQ86VV8 AC131281.2-201ENST00000520478 145 ntBASIC19.96■□□□□ 0.79
RTTNQ86VV8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.96■□□□□ 0.79
RTTNQ86VV8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RTTNQ86VV8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RTTNQ86VV8 AC092028.1-203ENST00000608262 953 ntBASIC19.95■□□□□ 0.78
RTTNQ86VV8 AC021242.3-201ENST00000607598 1377 ntBASIC19.95■□□□□ 0.78
RTTNQ86VV8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.95■□□□□ 0.78
RTTNQ86VV8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.95■□□□□ 0.78
RTTNQ86VV8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTTNQ86VV8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTTNQ86VV8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTTNQ86VV8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTTNQ86VV8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 AL022069.1-201ENST00000568025 1636 ntBASIC19.94■□□□□ 0.78
RTTNQ86VV8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTTNQ86VV8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTTNQ86VV8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RTTNQ86VV8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms