Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF20Q53R12 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 BX664725.1-201ENST00000438252 379 ntBASIC17.61■□□□□ 0.41
TM4SF20Q53R12 AC137630.3-201ENST00000607245 391 ntBASIC17.61■□□□□ 0.41
TM4SF20Q53R12 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 AC141586.4-201ENST00000624558 1573 ntBASIC17.61■□□□□ 0.41
TM4SF20Q53R12 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TM4SF20Q53R12 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF20Q53R12 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 AL022069.1-201ENST00000568025 1636 ntBASIC17.59■□□□□ 0.41
TM4SF20Q53R12 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF20Q53R12 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TM4SF20Q53R12 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF20Q53R12 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TM4SF20Q53R12 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TM4SF20Q53R12 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TM4SF20Q53R12 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 AC239859.2-201ENST00000444165 318 ntBASIC17.58■□□□□ 0.4
TM4SF20Q53R12 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF20Q53R12 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 AC131274.2-201ENST00000580697 1507 ntBASIC17.57■□□□□ 0.4
TM4SF20Q53R12 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 AC004812.2-201ENST00000611079 2094 ntBASIC17.57■□□□□ 0.4
TM4SF20Q53R12 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 KRT125P-201ENST00000546827 989 ntBASIC17.57■□□□□ 0.4
TM4SF20Q53R12 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 AL035685.1-201ENST00000636663 812 ntBASIC17.57■□□□□ 0.4
TM4SF20Q53R12 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TM4SF20Q53R12 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TM4SF20Q53R12 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TM4SF20Q53R12 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms