Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 HFA1YMR207C 6372 nt3.89□□□□□ -1.79
SHH3Q04487 MPP10YJR002W 1782 nt3.89□□□□□ -1.79
SHH3Q04487 TFG1YGR186W 2208 nt3.89□□□□□ -1.79
SHH3Q04487 SNF11YDR073W 510 nt3.88□□□□□ -1.79
SHH3Q04487 MNN10YDR245W 1182 nt3.88□□□□□ -1.79
SHH3Q04487 FAU1YER183C 636 nt3.88□□□□□ -1.79
SHH3Q04487 SUT1YGL162W 900 nt3.88□□□□□ -1.79
SHH3Q04487 CSR1YLR380W 1227 nt3.88□□□□□ -1.79
SHH3Q04487 YMR030W-AYMR030W-A 291 nt3.88□□□□□ -1.79
SHH3Q04487 MRL1YPR079W 1146 nt3.88□□□□□ -1.79
SHH3Q04487 POP4YBR257W 840 nt3.88□□□□□ -1.79
SHH3Q04487 APE1YKL103C 1545 nt3.88□□□□□ -1.79
SHH3Q04487 EUG1YDR518W 1554 nt3.88□□□□□ -1.79
SHH3Q04487 SDA1YGR245C 2304 nt3.88□□□□□ -1.79
SHH3Q04487 RAD1YPL022W 3303 nt3.88□□□□□ -1.79
SHH3Q04487 TOG1YER184C 2385 nt3.87□□□□□ -1.79
SHH3Q04487 RHB1YCR027C 630 nt3.87□□□□□ -1.79
SHH3Q04487 ASP1YDR321W 1146 nt3.87□□□□□ -1.79
SHH3Q04487 RPN12YFR052W 825 nt3.87□□□□□ -1.79
SHH3Q04487 SKI6YGR195W 741 nt3.87□□□□□ -1.79
SHH3Q04487 CBT1YKL208W 816 nt3.87□□□□□ -1.79
SHH3Q04487 CUE5YOR042W 1236 nt3.87□□□□□ -1.79
SHH3Q04487 RDL1YOR285W 420 nt3.87□□□□□ -1.79
SHH3Q04487 YCL022CYCL022C 516 nt3.87□□□□□ -1.79
SHH3Q04487 ISR1YPR106W 1332 nt3.87□□□□□ -1.79
SHH3Q04487 ATG23YLR431C 1362 nt3.87□□□□□ -1.79
SHH3Q04487 PRD1YCL057W 2139 nt3.86□□□□□ -1.79
SHH3Q04487 YEF1YEL041W 1488 nt3.86□□□□□ -1.79
SHH3Q04487 UPC2YDR213W 2742 nt3.86□□□□□ -1.79
SHH3Q04487 ARP2YDL029W 1176 nt3.86□□□□□ -1.79
SHH3Q04487 HST4YDR191W 1113 nt3.86□□□□□ -1.79
SHH3Q04487 PUS6YGR169C 1215 nt3.86□□□□□ -1.79
SHH3Q04487 ERP5YHR110W 639 nt3.86□□□□□ -1.79
SHH3Q04487 BBP1YPL255W 1158 nt3.86□□□□□ -1.79
SHH3Q04487 ARC40YBR234C 1155 nt3.86□□□□□ -1.79
SHH3Q04487 SUP35YDR172W 2058 nt3.86□□□□□ -1.79
SHH3Q04487 PDR15YDR406W 4590 nt3.85□□□□□ -1.79
SHH3Q04487 YCR006CYCR006C 474 nt3.85□□□□□ -1.79
SHH3Q04487 YDL172CYDL172C 480 nt3.85□□□□□ -1.79
SHH3Q04487 RSM10YDR041W 612 nt3.85□□□□□ -1.79
SHH3Q04487 YHR095WYHR095W 495 nt3.85□□□□□ -1.79
SHH3Q04487 KRE9YJL174W 831 nt3.85□□□□□ -1.79
SHH3Q04487 YJL218WYJL218W 591 nt3.85□□□□□ -1.79
SHH3Q04487 YPR109WYPR109W 885 nt3.85□□□□□ -1.79
SHH3Q04487 TAF5YBR198C 2397 nt3.85□□□□□ -1.79
SHH3Q04487 YSH1YLR277C 2340 nt3.84□□□□□ -1.79
SHH3Q04487 YTA12YMR089C 2478 nt3.84□□□□□ -1.79
SHH3Q04487 MHR1YDR296W 681 nt3.84□□□□□ -1.79
SHH3Q04487 YAL044W-AYAL044W-A 333 nt3.84□□□□□ -1.79
SHH3Q04487 YNL194CYNL194C 906 nt3.84□□□□□ -1.79
SHH3Q04487 RRB1YMR131C 1536 nt3.84□□□□□ -1.8
SHH3Q04487 GCR2YNL199C 1605 nt3.84□□□□□ -1.8
SHH3Q04487 SYP1YCR030C 2613 nt3.83□□□□□ -1.8
SHH3Q04487 RPS11AYDR025W 471 nt3.83□□□□□ -1.8
SHH3Q04487 HNT2YDR305C 654 nt3.83□□□□□ -1.8
SHH3Q04487 MLC1YGL106W 450 nt3.83□□□□□ -1.8
SHH3Q04487 YGL194C-AYGL194C-A 243 nt3.83□□□□□ -1.8
SHH3Q04487 GAT4YIR013C 366 nt3.83□□□□□ -1.8
SHH3Q04487 AVO2YMR068W 1281 nt3.83□□□□□ -1.8
SHH3Q04487 ATG18YFR021W 1503 nt3.83□□□□□ -1.8
SHH3Q04487 MDM30YLR368W 1797 nt3.83□□□□□ -1.8
SHH3Q04487 GIP1YBR045C 1920 nt3.83□□□□□ -1.8
SHH3Q04487 YGL036WYGL036W 2730 nt3.83□□□□□ -1.8
SHH3Q04487 YLR152CYLR152C 1731 nt3.82□□□□□ -1.8
SHH3Q04487 NUG1YER006W 1563 nt3.82□□□□□ -1.8
SHH3Q04487 RRP3YHR065C 1506 nt3.82□□□□□ -1.8
SHH3Q04487 HRR25YPL204W 1485 nt3.82□□□□□ -1.8
SHH3Q04487 NOP16YER002W 696 nt3.82□□□□□ -1.8
SHH3Q04487 RPL43BYJR094W-A 279 nt3.82□□□□□ -1.8
SHH3Q04487 ATP14YLR295C 375 nt3.82□□□□□ -1.8
SHH3Q04487 CSL4YNL232W 879 nt3.82□□□□□ -1.8
SHH3Q04487 OPY2YPR075C 1083 nt3.82□□□□□ -1.8
SHH3Q04487 PIM1YBL022C 3402 nt3.82□□□□□ -1.8
SHH3Q04487 HOS3YPL116W 2094 nt3.82□□□□□ -1.8
SHH3Q04487 RAD28YDR030C 1521 nt3.81□□□□□ -1.8
SHH3Q04487 PUT1YLR142W 1431 nt3.81□□□□□ -1.8
SHH3Q04487 MEC3YLR288C 1425 nt3.81□□□□□ -1.8
SHH3Q04487 NPL6YMR091C 1308 nt3.81□□□□□ -1.8
SHH3Q04487 KNH1YDL049C 807 nt3.81□□□□□ -1.8
SHH3Q04487 RIP1YEL024W 648 nt3.81□□□□□ -1.8
SHH3Q04487 YGR269WYGR269W 327 nt3.81□□□□□ -1.8
SHH3Q04487 YBL006W-AYBL006W-A 150 nt3.81□□□□□ -1.8
SHH3Q04487 SER1YOR184W 1188 nt3.81□□□□□ -1.8
SHH3Q04487 RSC30YHR056C 2652 nt3.81□□□□□ -1.8
SHH3Q04487 RCK2YLR248W 1833 nt3.81□□□□□ -1.8
SHH3Q04487 VHS3YOR054C 2025 nt3.8□□□□□ -1.8
SHH3Q04487 RAD30YDR419W 1899 nt3.8□□□□□ -1.8
SHH3Q04487 YPK9YOR291W 4419 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)CtK(CUU)C 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)D1tK(CUU)D1 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)D2tK(CUU)D2 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)E1tK(CUU)E1 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)E2tK(CUU)E2 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)FtK(CUU)F 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)G1tK(CUU)G1 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)G2tK(CUU)G2 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)G3tK(CUU)G3 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)ItK(CUU)I 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)JtK(CUU)J 73 nt3.8□□□□□ -1.8
SHH3Q04487 tK(CUU)KtK(CUU)K 73 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 34 ms