Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1P48729 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1A1P48729 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1A1P48729 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1P48729 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1P48729 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1P48729 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CSNK1A1P48729 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1A1P48729 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1A1P48729 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1P48729 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1A1P48729 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1A1P48729 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1A1P48729 AC239859.2-201ENST00000444165 318 ntBASIC20.21■□□□□ 0.83
CSNK1A1P48729 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CSNK1A1P48729 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CSNK1A1P48729 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1A1P48729 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1A1P48729 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1A1P48729 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.2■□□□□ 0.82
CSNK1A1P48729 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1A1P48729 MIR4787-201ENST00000607364 84 ntBASIC20.2■□□□□ 0.82
CSNK1A1P48729 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.2■□□□□ 0.82
CSNK1A1P48729 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1A1P48729 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CSNK1A1P48729 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CSNK1A1P48729 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.19■□□□□ 0.82
CSNK1A1P48729 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1A1P48729 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1A1P48729 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CSNK1A1P48729 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CSNK1A1P48729 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.18■□□□□ 0.82
CSNK1A1P48729 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.18■□□□□ 0.82
CSNK1A1P48729 AC092028.1-203ENST00000608262 953 ntBASIC20.18■□□□□ 0.82
CSNK1A1P48729 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CSNK1A1P48729 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CSNK1A1P48729 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CSNK1A1P48729 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.17■□□□□ 0.82
CSNK1A1P48729 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CSNK1A1P48729 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.17■□□□□ 0.82
CSNK1A1P48729 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.17■□□□□ 0.82
CSNK1A1P48729 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CSNK1A1P48729 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 AL035685.1-201ENST00000636663 812 ntBASIC20.16■□□□□ 0.82
CSNK1A1P48729 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CSNK1A1P48729 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CSNK1A1P48729 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.15■□□□□ 0.82
CSNK1A1P48729 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.15■□□□□ 0.82
CSNK1A1P48729 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CSNK1A1P48729 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.15■□□□□ 0.82
CSNK1A1P48729 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.15■□□□□ 0.82
CSNK1A1P48729 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.15■□□□□ 0.82
CSNK1A1P48729 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CSNK1A1P48729 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms