Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.16■□□□□ 0.82
TNFSF13O75888 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TNFSF13O75888 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TNFSF13O75888 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF13O75888 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 AC142381.3-201ENST00000568208 1670 ntBASIC20.15■□□□□ 0.82
TNFSF13O75888 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 AC138932.3-201ENST00000567634 1902 ntBASIC20.15■□□□□ 0.82
TNFSF13O75888 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF13O75888 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TNFSF13O75888 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TNFSF13O75888 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF13O75888 AC135279.3-201ENST00000610945 1311 ntBASIC20.14■□□□□ 0.81
TNFSF13O75888 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TNFSF13O75888 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFSF13O75888 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TNFSF13O75888 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF13O75888 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TNFSF13O75888 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TNFSF13O75888 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFSF13O75888 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.13■□□□□ 0.81
TNFSF13O75888 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF13O75888 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF13O75888 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 ALDH1A3-203ENST00000557963 1670 ntBASIC20.13■□□□□ 0.81
TNFSF13O75888 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF13O75888 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFSF13O75888 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF13O75888 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
TNFSF13O75888 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFSF13O75888 AC024257.2-201ENST00000549699 147 ntBASIC20.12■□□□□ 0.81
TNFSF13O75888 DUX4L19-201ENST00000557448 1267 ntBASIC20.12■□□□□ 0.81
TNFSF13O75888 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF13O75888 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFSF13O75888 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.11■□□□□ 0.81
TNFSF13O75888 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF13O75888 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF13O75888 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF13O75888 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF13O75888 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF13O75888 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF13O75888 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFSF13O75888 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF13O75888 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFSF13O75888 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF13O75888 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TNFSF13O75888 AL031432.3-201ENST00000607698 485 ntBASIC20.11■□□□□ 0.81
TNFSF13O75888 AC092171.4-201ENST00000609130 632 ntBASIC20.11■□□□□ 0.81
TNFSF13O75888 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFSF13O75888 C17orf82-201ENST00000623772 1530 ntBASIC20.11■□□□□ 0.81
TNFSF13O75888 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFSF13O75888 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF13O75888 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.11■□□□□ 0.81
TNFSF13O75888 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF13O75888 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF13O75888 AC020928.2-201ENST00000588717 2197 ntBASIC20.1■□□□□ 0.81
TNFSF13O75888 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFSF13O75888 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.1■□□□□ 0.81
TNFSF13O75888 AC099791.2-201ENST00000605725 427 ntBASIC20.1■□□□□ 0.81
TNFSF13O75888 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.1■□□□□ 0.81
TNFSF13O75888 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFSF13O75888 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFSF13O75888 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFSF13O75888 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
TNFSF13O75888 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF13O75888 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF13O75888 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
TNFSF13O75888 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFSF13O75888 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TNFSF13O75888 SYT6-210ENST00000641643 1587 ntBASIC20.08■□□□□ 0.81
TNFSF13O75888 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF13O75888 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF13O75888 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF13O75888 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF13O75888 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TNFSF13O75888 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TNFSF13O75888 MIR935-201ENST00000401179 91 ntBASIC20.08■□□□□ 0.81
TNFSF13O75888 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.08■□□□□ 0.81
TNFSF13O75888 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TNFSF13O75888 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.08■□□□□ 0.8
TNFSF13O75888 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TNFSF13O75888 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF13O75888 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF13O75888 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF13O75888 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TNFSF13O75888 EDA-201ENST00000338901 1233 ntBASIC20.07■□□□□ 0.8
TNFSF13O75888 SUDS3P1-201ENST00000505831 966 ntBASIC20.07■□□□□ 0.8
TNFSF13O75888 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.07■□□□□ 0.8
TNFSF13O75888 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms