Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
EDF1O60869 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.47■■□□□ 1.19
EDF1O60869 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
EDF1O60869 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
EDF1O60869 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
EDF1O60869 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
EDF1O60869 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.47■■□□□ 1.19
EDF1O60869 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
EDF1O60869 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.47■■□□□ 1.19
EDF1O60869 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
EDF1O60869 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
EDF1O60869 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
EDF1O60869 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.46■■□□□ 1.19
EDF1O60869 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
EDF1O60869 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
EDF1O60869 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
EDF1O60869 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.46■■□□□ 1.19
EDF1O60869 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.46■■□□□ 1.19
EDF1O60869 AC242852.2-201ENST00000615738 1807 ntBASIC22.46■■□□□ 1.19
EDF1O60869 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
EDF1O60869 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.46■■□□□ 1.19
EDF1O60869 AL161729.1-201ENST00000604104 1402 ntBASIC22.46■■□□□ 1.19
EDF1O60869 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.46■■□□□ 1.19
EDF1O60869 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
EDF1O60869 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.45■■□□□ 1.19
EDF1O60869 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.19
EDF1O60869 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
EDF1O60869 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 RP9P-202ENST00000450133 1212 ntBASIC22.45■■□□□ 1.18
EDF1O60869 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.45■■□□□ 1.18
EDF1O60869 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.45■■□□□ 1.18
EDF1O60869 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
EDF1O60869 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
EDF1O60869 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.45■■□□□ 1.18
EDF1O60869 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.45■■□□□ 1.18
EDF1O60869 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
EDF1O60869 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
EDF1O60869 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
EDF1O60869 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
EDF1O60869 ZNRF2P2-203ENST00000454624 420 ntBASIC22.44■■□□□ 1.18
EDF1O60869 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.44■■□□□ 1.18
EDF1O60869 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.44■■□□□ 1.18
EDF1O60869 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
EDF1O60869 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
EDF1O60869 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.43■■□□□ 1.18
EDF1O60869 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
EDF1O60869 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
EDF1O60869 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
EDF1O60869 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
EDF1O60869 KRT18P10-201ENST00000388836 1287 ntBASIC22.43■■□□□ 1.18
EDF1O60869 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.43■■□□□ 1.18
EDF1O60869 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.43■■□□□ 1.18
EDF1O60869 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
EDF1O60869 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.42■■□□□ 1.18
EDF1O60869 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.42■■□□□ 1.18
EDF1O60869 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
EDF1O60869 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
EDF1O60869 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.41■■□□□ 1.18
EDF1O60869 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.41■■□□□ 1.18
EDF1O60869 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
EDF1O60869 AC093536.1-201ENST00000569153 554 ntBASIC22.41■■□□□ 1.18
EDF1O60869 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.41■■□□□ 1.18
EDF1O60869 AC092296.2-201ENST00000589470 999 ntBASIC22.41■■□□□ 1.18
EDF1O60869 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
EDF1O60869 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
EDF1O60869 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
EDF1O60869 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.41■■□□□ 1.18
EDF1O60869 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
EDF1O60869 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
EDF1O60869 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
EDF1O60869 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
EDF1O60869 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.4■■□□□ 1.18
EDF1O60869 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
EDF1O60869 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
EDF1O60869 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
EDF1O60869 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.18
EDF1O60869 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EDF1O60869 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.39■■□□□ 1.17
EDF1O60869 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.39■■□□□ 1.17
EDF1O60869 ESRRAP2-201ENST00000418437 1549 ntBASIC22.39■■□□□ 1.17
EDF1O60869 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
EDF1O60869 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EDF1O60869 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
EDF1O60869 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.39■■□□□ 1.17
EDF1O60869 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.38■■□□□ 1.17
EDF1O60869 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EDF1O60869 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.38■■□□□ 1.17
EDF1O60869 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EDF1O60869 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms