Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SURF4O15260 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 AL592293.1-201ENST00000502889 1188 ntBASIC20.56■□□□□ 0.88
SURF4O15260 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.56■□□□□ 0.88
SURF4O15260 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SURF4O15260 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SURF4O15260 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SURF4O15260 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.55■□□□□ 0.88
SURF4O15260 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.55■□□□□ 0.88
SURF4O15260 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SURF4O15260 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SURF4O15260 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SURF4O15260 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 C1orf229-201ENST00000623686 2258 ntBASIC20.54■□□□□ 0.88
SURF4O15260 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SURF4O15260 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SURF4O15260 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.53■□□□□ 0.88
SURF4O15260 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.53■□□□□ 0.88
SURF4O15260 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SURF4O15260 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SURF4O15260 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SURF4O15260 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SURF4O15260 AL022069.1-201ENST00000568025 1636 ntBASIC20.53■□□□□ 0.88
SURF4O15260 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
SURF4O15260 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SURF4O15260 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SURF4O15260 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SURF4O15260 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SURF4O15260 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.51■□□□□ 0.87
SURF4O15260 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SURF4O15260 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SURF4O15260 KRT18P60-201ENST00000312876 1297 ntBASIC20.51■□□□□ 0.87
SURF4O15260 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.51■□□□□ 0.87
SURF4O15260 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
SURF4O15260 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SURF4O15260 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SURF4O15260 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.51■□□□□ 0.87
SURF4O15260 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SURF4O15260 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.5■□□□□ 0.87
SURF4O15260 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SURF4O15260 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SURF4O15260 MIR6765-201ENST00000614092 87 ntBASIC20.5■□□□□ 0.87
SURF4O15260 AC012354.3-201ENST00000623734 483 ntBASIC20.5■□□□□ 0.87
SURF4O15260 EP400NL-214ENST00000641289 2402 ntBASIC20.5■□□□□ 0.87
SURF4O15260 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SURF4O15260 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SURF4O15260 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SURF4O15260 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SURF4O15260 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.49■□□□□ 0.87
SURF4O15260 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SURF4O15260 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SURF4O15260 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SURF4O15260 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.49■□□□□ 0.87
SURF4O15260 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SURF4O15260 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SURF4O15260 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SURF4O15260 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SURF4O15260 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.49■□□□□ 0.87
SURF4O15260 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms