Protein–RNA interactions for Protein: A4QN01

LINC01553, Putative uncharacterized protein encoded by LINC01553, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553A4QN01 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINC01553A4QN01 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINC01553A4QN01 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINC01553A4QN01 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.51■■□□□ 1.51
LINC01553A4QN01 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.51■■□□□ 1.51
LINC01553A4QN01 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.51■■□□□ 1.51
LINC01553A4QN01 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.51■■□□□ 1.51
LINC01553A4QN01 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.51■■□□□ 1.51
LINC01553A4QN01 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINC01553A4QN01 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINC01553A4QN01 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LINC01553A4QN01 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.5■■□□□ 1.51
LINC01553A4QN01 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.5■■□□□ 1.51
LINC01553A4QN01 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.5■■□□□ 1.51
LINC01553A4QN01 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.5■■□□□ 1.51
LINC01553A4QN01 TSPY26P-201ENST00000476365 1326 ntBASIC24.5■■□□□ 1.51
LINC01553A4QN01 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LINC01553A4QN01 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.5■■□□□ 1.51
LINC01553A4QN01 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.5■■□□□ 1.51
LINC01553A4QN01 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LINC01553A4QN01 AC004911.1-201ENST00000416316 871 ntBASIC24.49■■□□□ 1.51
LINC01553A4QN01 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
LINC01553A4QN01 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LINC01553A4QN01 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
LINC01553A4QN01 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LINC01553A4QN01 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LINC01553A4QN01 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.48■■□□□ 1.51
LINC01553A4QN01 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LINC01553A4QN01 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LINC01553A4QN01 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LINC01553A4QN01 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LINC01553A4QN01 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.47■■□□□ 1.51
LINC01553A4QN01 AC027612.3-201ENST00000413684 1047 ntBASIC24.46■■□□□ 1.51
LINC01553A4QN01 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.46■■□□□ 1.51
LINC01553A4QN01 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.46■■□□□ 1.51
LINC01553A4QN01 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.46■■□□□ 1.51
LINC01553A4QN01 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
LINC01553A4QN01 pRNA.6-201ENST00000610482 90 ntBASIC24.46■■□□□ 1.51
LINC01553A4QN01 pRNA.5-201ENST00000612139 90 ntBASIC24.46■■□□□ 1.51
LINC01553A4QN01 pRNA.11-201ENST00000618423 90 ntBASIC24.46■■□□□ 1.51
LINC01553A4QN01 pRNA.13-201ENST00000619112 90 ntBASIC24.46■■□□□ 1.51
LINC01553A4QN01 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
LINC01553A4QN01 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.46■■□□□ 1.51
LINC01553A4QN01 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
LINC01553A4QN01 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
LINC01553A4QN01 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
LINC01553A4QN01 ID1-201ENST00000376105 1233 ntBASIC24.45■■□□□ 1.5
LINC01553A4QN01 AC123595.1-201ENST00000440769 1046 ntBASIC24.45■■□□□ 1.5
LINC01553A4QN01 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
LINC01553A4QN01 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC01553A4QN01 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.45■■□□□ 1.5
LINC01553A4QN01 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.45■■□□□ 1.5
LINC01553A4QN01 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC01553A4QN01 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINC01553A4QN01 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC01553A4QN01 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.44■■□□□ 1.5
LINC01553A4QN01 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINC01553A4QN01 AL358852.1-201ENST00000623174 1268 ntBASIC24.44■■□□□ 1.5
LINC01553A4QN01 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
LINC01553A4QN01 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINC01553A4QN01 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
LINC01553A4QN01 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LINC01553A4QN01 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LINC01553A4QN01 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
LINC01553A4QN01 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LINC01553A4QN01 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LINC01553A4QN01 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINC01553A4QN01 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.42■■□□□ 1.5
LINC01553A4QN01 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC01553A4QN01 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINC01553A4QN01 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LINC01553A4QN01 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC01553A4QN01 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.41■■□□□ 1.5
LINC01553A4QN01 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC01553A4QN01 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.41■■□□□ 1.5
LINC01553A4QN01 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC01553A4QN01 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC01553A4QN01 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.41■■□□□ 1.5
LINC01553A4QN01 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINC01553A4QN01 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms