Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56-RWDD3S4R434 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56-RWDD3S4R434 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM56-RWDD3S4R434 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 ABHD17AP4-201ENST00000411545 909 ntBASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 RAP2CP1-202ENST00000605179 643 ntBASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56-RWDD3S4R434 LINC00526-201ENST00000581067 1875 ntBASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 AC007029.1-201ENST00000604183 313 ntBASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM56-RWDD3S4R434 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 GUSBP5-202ENST00000510805 1989 ntBASIC18.7■□□□□ 0.58
TMEM56-RWDD3S4R434 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 AC127496.7-201ENST00000625110 1798 ntBASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 AC026202.3-201ENST00000600805 1127 ntBASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM56-RWDD3S4R434 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMEM56-RWDD3S4R434 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 ECEL1P1-201ENST00000373592 1742 ntBASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 AC090877.2-201ENST00000558441 1738 ntBASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TMEM56-RWDD3S4R434 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.66■□□□□ 0.58
TMEM56-RWDD3S4R434 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMEM56-RWDD3S4R434 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.64■□□□□ 0.58
TMEM56-RWDD3S4R434 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TMEM56-RWDD3S4R434 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
TMEM56-RWDD3S4R434 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM56-RWDD3S4R434 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms