Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PCDHA13Q9Y5I0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 DUSP8P3-201ENST00000399571 1760 ntBASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.48■■□□□ 1.51
PCDHA13Q9Y5I0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 AL117328.2-201ENST00000624617 1940 ntBASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 RNF126P1-201ENST00000567452 1320 ntBASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA13Q9Y5I0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA13Q9Y5I0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA13Q9Y5I0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHA13Q9Y5I0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA13Q9Y5I0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA13Q9Y5I0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA13Q9Y5I0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 AC233723.2-201ENST00000623798 2106 ntBASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHA13Q9Y5I0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHA13Q9Y5I0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA13Q9Y5I0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
PCDHA13Q9Y5I0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHA13Q9Y5I0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA13Q9Y5I0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
PCDHA13Q9Y5I0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHA13Q9Y5I0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA13Q9Y5I0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA13Q9Y5I0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHA13Q9Y5I0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDHA13Q9Y5I0 ABHD17AP3-201ENST00000503096 1137 ntBASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 MIR6765-201ENST00000614092 87 ntBASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHA13Q9Y5I0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PCDHA13Q9Y5I0 C1orf229-201ENST00000623686 2258 ntBASIC24.38■■□□□ 1.49
PCDHA13Q9Y5I0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA13Q9Y5I0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA13Q9Y5I0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHA13Q9Y5I0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms