Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 AC019171.1-201ENST00000601251 1056 ntBASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RHBDD3Q9Y3P4 AC012354.3-201ENST00000623734 483 ntBASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RHBDD3Q9Y3P4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.94■□□□□ 0.78
RHBDD3Q9Y3P4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDD3Q9Y3P4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.94■□□□□ 0.78
RHBDD3Q9Y3P4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RHBDD3Q9Y3P4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.94■□□□□ 0.78
RHBDD3Q9Y3P4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 C9orf163-202ENST00000624034 2573 ntBASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.93■□□□□ 0.78
RHBDD3Q9Y3P4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 AL033527.3-201ENST00000566366 1196 ntBASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RHBDD3Q9Y3P4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 AC010980.1-201ENST00000587192 1142 ntBASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 PVT1_1.1-201ENST00000615125 194 ntBASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
RHBDD3Q9Y3P4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 AC022616.5-201ENST00000518796 181 ntBASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 AC074183.2-201ENST00000623112 922 ntBASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RHBDD3Q9Y3P4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RHBDD3Q9Y3P4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RHBDD3Q9Y3P4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 AC079834.2-201ENST00000609776 1949 ntBASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.88■□□□□ 0.77
RHBDD3Q9Y3P4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms