Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 AC025884.2-201ENST00000553429 711 ntBASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 AC092068.2-201ENST00000590491 1708 ntBASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RCL1Q9Y2P8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCL1Q9Y2P8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.64■□□□□ 0.58
RCL1Q9Y2P8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 AL157400.5-201ENST00000507624 621 ntBASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RCL1Q9Y2P8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 AC127496.7-201ENST00000625110 1798 ntBASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCL1Q9Y2P8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 MIR3960-201ENST00000583311 91 ntBASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 FOXO3B-201ENST00000395675 1928 ntBASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCL1Q9Y2P8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.61■□□□□ 0.57
RCL1Q9Y2P8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 ECEL1P1-201ENST00000373592 1742 ntBASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RCL1Q9Y2P8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 AC137767.1-201ENST00000602918 1920 ntBASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.59■□□□□ 0.57
RCL1Q9Y2P8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms