Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
BLOC1S4Q9NUP1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
BLOC1S4Q9NUP1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
BLOC1S4Q9NUP1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 ALDH1A3-203ENST00000557963 1670 ntBASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 BX664725.1-201ENST00000438252 379 ntBASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.56■■□□□ 1.68
BLOC1S4Q9NUP1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
BLOC1S4Q9NUP1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 Z92544.1-202ENST00000571933 1220 ntBASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
BLOC1S4Q9NUP1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
BLOC1S4Q9NUP1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
BLOC1S4Q9NUP1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
BLOC1S4Q9NUP1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.68
BLOC1S4Q9NUP1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
BLOC1S4Q9NUP1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
BLOC1S4Q9NUP1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
BLOC1S4Q9NUP1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
BLOC1S4Q9NUP1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.51■■□□□ 1.67
BLOC1S4Q9NUP1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
BLOC1S4Q9NUP1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
BLOC1S4Q9NUP1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 AC239859.2-201ENST00000444165 318 ntBASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.5■■□□□ 1.67
BLOC1S4Q9NUP1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
BLOC1S4Q9NUP1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BLOC1S4Q9NUP1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms