Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NANOGQ9H9S0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NANOGQ9H9S0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NANOGQ9H9S0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NANOGQ9H9S0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NANOGQ9H9S0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
NANOGQ9H9S0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 EP400NL-214ENST00000641289 2402 ntBASIC21.69■■□□□ 1.06
NANOGQ9H9S0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NANOGQ9H9S0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 C1orf229-201ENST00000623686 2258 ntBASIC21.68■■□□□ 1.06
NANOGQ9H9S0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NANOGQ9H9S0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 AC009831.1-201ENST00000580420 1582 ntBASIC21.67■■□□□ 1.06
NANOGQ9H9S0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 AL161729.1-201ENST00000604104 1402 ntBASIC21.67■■□□□ 1.06
NANOGQ9H9S0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NANOGQ9H9S0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NANOGQ9H9S0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NANOGQ9H9S0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NANOGQ9H9S0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.66■■□□□ 1.06
NANOGQ9H9S0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.66■■□□□ 1.06
NANOGQ9H9S0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
NANOGQ9H9S0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 RPS2P7-201ENST00000447334 885 ntBASIC21.65■■□□□ 1.06
NANOGQ9H9S0 AC133552.2-201ENST00000619106 1032 ntBASIC21.65■■□□□ 1.06
NANOGQ9H9S0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NANOGQ9H9S0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NANOGQ9H9S0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NANOGQ9H9S0 GPX1-201ENST00000419349 1106 ntBASIC21.64■■□□□ 1.05
NANOGQ9H9S0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
NANOGQ9H9S0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NANOGQ9H9S0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NANOGQ9H9S0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NANOGQ9H9S0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NANOGQ9H9S0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
NANOGQ9H9S0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NANOGQ9H9S0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.6■■□□□ 1.05
NANOGQ9H9S0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms