Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NSUN3Q9H649 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NSUN3Q9H649 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NSUN3Q9H649 AC009102.2-201ENST00000606772 1639 ntBASIC24.4■■□□□ 1.5
NSUN3Q9H649 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NSUN3Q9H649 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.4■■□□□ 1.5
NSUN3Q9H649 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.4■■□□□ 1.5
NSUN3Q9H649 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.4■■□□□ 1.5
NSUN3Q9H649 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.4■■□□□ 1.5
NSUN3Q9H649 AC241377.3-202ENST00000626088 1088 ntBASIC24.4■■□□□ 1.5
NSUN3Q9H649 AC241585.3-202ENST00000628937 1088 ntBASIC24.4■■□□□ 1.5
NSUN3Q9H649 AC245100.8-202ENST00000629247 1058 ntBASIC24.4■■□□□ 1.5
NSUN3Q9H649 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.4■■□□□ 1.5
NSUN3Q9H649 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
NSUN3Q9H649 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
NSUN3Q9H649 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
NSUN3Q9H649 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
NSUN3Q9H649 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NSUN3Q9H649 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
NSUN3Q9H649 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
NSUN3Q9H649 BX842568.3-201ENST00000418104 571 ntBASIC24.39■■□□□ 1.49
NSUN3Q9H649 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.39■■□□□ 1.49
NSUN3Q9H649 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NSUN3Q9H649 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
NSUN3Q9H649 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NSUN3Q9H649 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NSUN3Q9H649 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NSUN3Q9H649 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.39■■□□□ 1.49
NSUN3Q9H649 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NSUN3Q9H649 KRT18P5-201ENST00000436075 1291 ntBASIC24.38■■□□□ 1.49
NSUN3Q9H649 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.38■■□□□ 1.49
NSUN3Q9H649 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.38■■□□□ 1.49
NSUN3Q9H649 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.38■■□□□ 1.49
NSUN3Q9H649 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NSUN3Q9H649 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NSUN3Q9H649 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NSUN3Q9H649 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.37■■□□□ 1.49
NSUN3Q9H649 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
NSUN3Q9H649 SLC47A1P1-202ENST00000449666 945 ntBASIC24.36■■□□□ 1.49
NSUN3Q9H649 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.36■■□□□ 1.49
NSUN3Q9H649 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NSUN3Q9H649 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.36■■□□□ 1.49
NSUN3Q9H649 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
NSUN3Q9H649 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NSUN3Q9H649 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NSUN3Q9H649 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NSUN3Q9H649 AC096887.2-201ENST00000623443 1957 ntBASIC24.35■■□□□ 1.49
NSUN3Q9H649 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NSUN3Q9H649 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NSUN3Q9H649 YBX1P1-201ENST00000445822 960 ntBASIC24.35■■□□□ 1.49
NSUN3Q9H649 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.35■■□□□ 1.49
NSUN3Q9H649 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.35■■□□□ 1.49
NSUN3Q9H649 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
NSUN3Q9H649 C17orf82-201ENST00000623772 1530 ntBASIC24.35■■□□□ 1.49
NSUN3Q9H649 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NSUN3Q9H649 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.34■■□□□ 1.49
NSUN3Q9H649 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
NSUN3Q9H649 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.34■■□□□ 1.49
NSUN3Q9H649 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NSUN3Q9H649 AC131274.2-201ENST00000580697 1507 ntBASIC24.34■■□□□ 1.49
NSUN3Q9H649 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
NSUN3Q9H649 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
NSUN3Q9H649 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.33■■□□□ 1.49
NSUN3Q9H649 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NSUN3Q9H649 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.33■■□□□ 1.49
NSUN3Q9H649 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
NSUN3Q9H649 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NSUN3Q9H649 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.33■■□□□ 1.49
NSUN3Q9H649 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
NSUN3Q9H649 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
NSUN3Q9H649 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
NSUN3Q9H649 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
NSUN3Q9H649 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NSUN3Q9H649 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
NSUN3Q9H649 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.32■■□□□ 1.48
NSUN3Q9H649 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NSUN3Q9H649 AC092437.1-201ENST00000624794 1048 ntBASIC24.32■■□□□ 1.48
NSUN3Q9H649 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
NSUN3Q9H649 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NSUN3Q9H649 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
NSUN3Q9H649 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
NSUN3Q9H649 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.31■■□□□ 1.48
NSUN3Q9H649 AC006455.2-201ENST00000429931 906 ntBASIC24.31■■□□□ 1.48
NSUN3Q9H649 AL031602.1-201ENST00000633169 911 ntBASIC24.31■■□□□ 1.48
NSUN3Q9H649 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.3■■□□□ 1.48
NSUN3Q9H649 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NSUN3Q9H649 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NSUN3Q9H649 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NSUN3Q9H649 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.3■■□□□ 1.48
NSUN3Q9H649 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NSUN3Q9H649 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NSUN3Q9H649 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.3■■□□□ 1.48
NSUN3Q9H649 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.3■■□□□ 1.48
NSUN3Q9H649 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms