Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL391422.3-201ENST00000603791 2761 ntBASIC18.47■□□□□ 0.55
NKX6-2Q9C056 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NKX6-2Q9C056 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
NKX6-2Q9C056 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NKX6-2Q9C056 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
NKX6-2Q9C056 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-2Q9C056 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-2Q9C056 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.45■□□□□ 0.54
NKX6-2Q9C056 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-2Q9C056 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NKX6-2Q9C056 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NKX6-2Q9C056 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NKX6-2Q9C056 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NKX6-2Q9C056 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NKX6-2Q9C056 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NKX6-2Q9C056 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NKX6-2Q9C056 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NKX6-2Q9C056 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NKX6-2Q9C056 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
NKX6-2Q9C056 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms