Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.07■■□□□ 1.44
SNX30Q5VWJ9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.07■■□□□ 1.44
SNX30Q5VWJ9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.07■■□□□ 1.44
SNX30Q5VWJ9 AL022069.1-201ENST00000568025 1636 ntBASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 AL512631.2-201ENST00000604634 923 ntBASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
SNX30Q5VWJ9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.05■■□□□ 1.44
SNX30Q5VWJ9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 AP003733.4-201ENST00000623785 1697 ntBASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SNX30Q5VWJ9 HLA-L-211ENST00000482052 1765 ntBASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 AL161729.1-201ENST00000604104 1402 ntBASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SNX30Q5VWJ9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 MIR4466-201ENST00000606121 54 ntBASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SNX30Q5VWJ9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SNX30Q5VWJ9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SNX30Q5VWJ9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SNX30Q5VWJ9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SNX30Q5VWJ9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24■■□□□ 1.43
SNX30Q5VWJ9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24■■□□□ 1.43
SNX30Q5VWJ9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24■■□□□ 1.43
SNX30Q5VWJ9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
SNX30Q5VWJ9 AC005703.6-201ENST00000623265 1329 ntBASIC24■■□□□ 1.43
SNX30Q5VWJ9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24■■□□□ 1.43
SNX30Q5VWJ9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SNX30Q5VWJ9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNX30Q5VWJ9 AL136116.3-201ENST00000402907 1138 ntBASIC23.98■■□□□ 1.43
SNX30Q5VWJ9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SNX30Q5VWJ9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SNX30Q5VWJ9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SNX30Q5VWJ9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SNX30Q5VWJ9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms