Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDUFA1O15239 RP9P-202ENST00000450133 1212 ntBASIC15.6■□□□□ 0.09
NDUFA1O15239 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.6■□□□□ 0.09
NDUFA1O15239 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NDUFA1O15239 AC022413.1-201ENST00000624602 984 ntBASIC15.6■□□□□ 0.09
NDUFA1O15239 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NDUFA1O15239 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDUFA1O15239 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NDUFA1O15239 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NDUFA1O15239 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC15.59■□□□□ 0.09
NDUFA1O15239 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NDUFA1O15239 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC15.59■□□□□ 0.09
NDUFA1O15239 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NDUFA1O15239 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NDUFA1O15239 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NDUFA1O15239 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NDUFA1O15239 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC15.58■□□□□ 0.09
NDUFA1O15239 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NDUFA1O15239 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDUFA1O15239 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDUFA1O15239 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.58■□□□□ 0.08
NDUFA1O15239 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
NDUFA1O15239 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.58■□□□□ 0.08
NDUFA1O15239 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC15.58■□□□□ 0.08
NDUFA1O15239 LINC00526-201ENST00000581067 1875 ntBASIC15.58■□□□□ 0.08
NDUFA1O15239 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NDUFA1O15239 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.58■□□□□ 0.08
NDUFA1O15239 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
NDUFA1O15239 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 AC137767.1-201ENST00000602918 1920 ntBASIC15.57■□□□□ 0.08
NDUFA1O15239 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.57■□□□□ 0.08
NDUFA1O15239 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NDUFA1O15239 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC15.57■□□□□ 0.08
NDUFA1O15239 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
NDUFA1O15239 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC15.57■□□□□ 0.08
NDUFA1O15239 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
NDUFA1O15239 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFA1O15239 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 KRT18P10-201ENST00000388836 1287 ntBASIC15.56■□□□□ 0.08
NDUFA1O15239 HES4-202ENST00000428771 1040 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFA1O15239 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC15.56■□□□□ 0.08
NDUFA1O15239 AC093536.1-201ENST00000569153 554 ntBASIC15.56■□□□□ 0.08
NDUFA1O15239 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.56■□□□□ 0.08
NDUFA1O15239 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
NDUFA1O15239 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA1O15239 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NDUFA1O15239 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NDUFA1O15239 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NDUFA1O15239 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NDUFA1O15239 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFA1O15239 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA1O15239 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
NDUFA1O15239 SRP68-213ENST00000629930 165 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA1O15239 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA1O15239 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms