Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TRGV1A0A0A0MS02 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV1A0A0A0MS02 AL022069.1-201ENST00000568025 1636 ntBASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 KRT18P24-201ENST00000344739 1156 ntBASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 MIR4508-201ENST00000584178 70 ntBASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV1A0A0A0MS02 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRGV1A0A0A0MS02 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRGV1A0A0A0MS02 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRGV1A0A0A0MS02 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 MIR4281-201ENST00000580852 62 ntBASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 AL161729.1-201ENST00000604104 1402 ntBASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRGV1A0A0A0MS02 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRGV1A0A0A0MS02 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRGV1A0A0A0MS02 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms