Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.7■■□□□ 1.7
BLOC1S4Q9NUP1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.7■■□□□ 1.7
BLOC1S4Q9NUP1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
BLOC1S4Q9NUP1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.69■■□□□ 1.7
BLOC1S4Q9NUP1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
BLOC1S4Q9NUP1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
BLOC1S4Q9NUP1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
BLOC1S4Q9NUP1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.69■■□□□ 1.7
BLOC1S4Q9NUP1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.69■■□□□ 1.7
BLOC1S4Q9NUP1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
BLOC1S4Q9NUP1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 AL451085.2-201ENST00000605085 799 ntBASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.67■■□□□ 1.7
BLOC1S4Q9NUP1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.66■■□□□ 1.7
BLOC1S4Q9NUP1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.65■■□□□ 1.7
BLOC1S4Q9NUP1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
BLOC1S4Q9NUP1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.64■■□□□ 1.69
BLOC1S4Q9NUP1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
BLOC1S4Q9NUP1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
BLOC1S4Q9NUP1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.63■■□□□ 1.69
BLOC1S4Q9NUP1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
BLOC1S4Q9NUP1 AC004448.1-201ENST00000458332 883 ntBASIC25.63■■□□□ 1.69
BLOC1S4Q9NUP1 AC021242.3-201ENST00000607598 1377 ntBASIC25.63■■□□□ 1.69
BLOC1S4Q9NUP1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
BLOC1S4Q9NUP1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.63■■□□□ 1.69
BLOC1S4Q9NUP1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
BLOC1S4Q9NUP1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
BLOC1S4Q9NUP1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.62■■□□□ 1.69
BLOC1S4Q9NUP1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
BLOC1S4Q9NUP1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 AC009299.2-201ENST00000482477 511 ntBASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.61■■□□□ 1.69
BLOC1S4Q9NUP1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 SNX5-217ENST00000606557 1087 ntBASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.6■■□□□ 1.69
BLOC1S4Q9NUP1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
BLOC1S4Q9NUP1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms