Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.21■□□□□ 0.83
COMMD4Q9H0A8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD4Q9H0A8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD4Q9H0A8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD4Q9H0A8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 C9orf163-202ENST00000624034 2573 ntBASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD4Q9H0A8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD4Q9H0A8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD4Q9H0A8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
COMMD4Q9H0A8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD4Q9H0A8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COMMD4Q9H0A8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.13■□□□□ 0.81
COMMD4Q9H0A8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms