Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 UNC93B8-201ENST00000511903 705 ntBASIC21.12■□□□□ 0.97
TIMP4Q99727 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.12■□□□□ 0.97
TIMP4Q99727 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.12■□□□□ 0.97
TIMP4Q99727 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.12■□□□□ 0.97
TIMP4Q99727 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP4Q99727 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TIMP4Q99727 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TIMP4Q99727 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.11■□□□□ 0.97
TIMP4Q99727 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TIMP4Q99727 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.11■□□□□ 0.97
TIMP4Q99727 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.11■□□□□ 0.97
TIMP4Q99727 AC092028.1-203ENST00000608262 953 ntBASIC21.11■□□□□ 0.97
TIMP4Q99727 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TIMP4Q99727 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TIMP4Q99727 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TIMP4Q99727 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TIMP4Q99727 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 AC090877.2-201ENST00000558441 1738 ntBASIC21.1■□□□□ 0.97
TIMP4Q99727 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.1■□□□□ 0.97
TIMP4Q99727 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.1■□□□□ 0.97
TIMP4Q99727 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.1■□□□□ 0.97
TIMP4Q99727 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TIMP4Q99727 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP4Q99727 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP4Q99727 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
TIMP4Q99727 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP4Q99727 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.09■□□□□ 0.97
TIMP4Q99727 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.09■□□□□ 0.97
TIMP4Q99727 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TIMP4Q99727 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.09■□□□□ 0.97
TIMP4Q99727 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TIMP4Q99727 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP4Q99727 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP4Q99727 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.08■□□□□ 0.97
TIMP4Q99727 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP4Q99727 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP4Q99727 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.08■□□□□ 0.97
TIMP4Q99727 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.08■□□□□ 0.97
TIMP4Q99727 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.08■□□□□ 0.97
TIMP4Q99727 TSPY9P-201ENST00000440215 945 ntBASIC21.08■□□□□ 0.97
TIMP4Q99727 TSPY11P-201ENST00000442607 1045 ntBASIC21.08■□□□□ 0.97
TIMP4Q99727 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.08■□□□□ 0.97
TIMP4Q99727 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TIMP4Q99727 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.08■□□□□ 0.97
TIMP4Q99727 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.08■□□□□ 0.97
TIMP4Q99727 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TIMP4Q99727 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP4Q99727 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
TIMP4Q99727 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.07■□□□□ 0.96
TIMP4Q99727 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.07■□□□□ 0.96
TIMP4Q99727 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TIMP4Q99727 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.06■□□□□ 0.96
TIMP4Q99727 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP4Q99727 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.06■□□□□ 0.96
TIMP4Q99727 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TIMP4Q99727 KRT16P3-201ENST00000439127 1283 ntBASIC21.06■□□□□ 0.96
TIMP4Q99727 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.06■□□□□ 0.96
TIMP4Q99727 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TIMP4Q99727 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.06■□□□□ 0.96
TIMP4Q99727 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TIMP4Q99727 AF131216.4-201ENST00000638924 1588 ntBASIC21.06■□□□□ 0.96
TIMP4Q99727 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.05■□□□□ 0.96
TIMP4Q99727 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP4Q99727 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
TIMP4Q99727 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP4Q99727 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP4Q99727 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TIMP4Q99727 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.05■□□□□ 0.96
TIMP4Q99727 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP4Q99727 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP4Q99727 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TIMP4Q99727 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP4Q99727 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMP4Q99727 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP4Q99727 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP4Q99727 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMP4Q99727 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.04■□□□□ 0.96
TIMP4Q99727 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.04■□□□□ 0.96
TIMP4Q99727 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP4Q99727 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP4Q99727 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TIMP4Q99727 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TIMP4Q99727 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.04■□□□□ 0.96
TIMP4Q99727 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.03■□□□□ 0.96
TIMP4Q99727 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP4Q99727 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP4Q99727 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TIMP4Q99727 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms