Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TWNKQ96RR1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
TWNKQ96RR1 AC004448.1-201ENST00000458332 883 ntBASIC24.53■■□□□ 1.52
TWNKQ96RR1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TWNKQ96RR1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.53■■□□□ 1.52
TWNKQ96RR1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
TWNKQ96RR1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TWNKQ96RR1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.52■■□□□ 1.52
TWNKQ96RR1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
TWNKQ96RR1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
TWNKQ96RR1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.52■■□□□ 1.52
TWNKQ96RR1 TSPY9P-201ENST00000440215 945 ntBASIC24.52■■□□□ 1.52
TWNKQ96RR1 TSPY11P-201ENST00000442607 1045 ntBASIC24.52■■□□□ 1.52
TWNKQ96RR1 AL022069.1-201ENST00000568025 1636 ntBASIC24.52■■□□□ 1.52
TWNKQ96RR1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TWNKQ96RR1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TWNKQ96RR1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
TWNKQ96RR1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TWNKQ96RR1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
TWNKQ96RR1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.51■■□□□ 1.51
TWNKQ96RR1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TWNKQ96RR1 AC004812.2-201ENST00000611079 2094 ntBASIC24.5■■□□□ 1.51
TWNKQ96RR1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.5■■□□□ 1.51
TWNKQ96RR1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TWNKQ96RR1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.5■■□□□ 1.51
TWNKQ96RR1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
TWNKQ96RR1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.5■■□□□ 1.51
TWNKQ96RR1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TWNKQ96RR1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.49■■□□□ 1.51
TWNKQ96RR1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.49■■□□□ 1.51
TWNKQ96RR1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TWNKQ96RR1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TWNKQ96RR1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TWNKQ96RR1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.48■■□□□ 1.51
TWNKQ96RR1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TWNKQ96RR1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.48■■□□□ 1.51
TWNKQ96RR1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TWNKQ96RR1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.48■■□□□ 1.51
TWNKQ96RR1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.48■■□□□ 1.51
TWNKQ96RR1 AC141586.4-201ENST00000624558 1573 ntBASIC24.47■■□□□ 1.51
TWNKQ96RR1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TWNKQ96RR1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
TWNKQ96RR1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TWNKQ96RR1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.47■■□□□ 1.51
TWNKQ96RR1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TWNKQ96RR1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TWNKQ96RR1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TWNKQ96RR1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TWNKQ96RR1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TWNKQ96RR1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.46■■□□□ 1.51
TWNKQ96RR1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TWNKQ96RR1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.46■■□□□ 1.51
TWNKQ96RR1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.46■■□□□ 1.51
TWNKQ96RR1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.46■■□□□ 1.51
TWNKQ96RR1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
TWNKQ96RR1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TWNKQ96RR1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TWNKQ96RR1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TWNKQ96RR1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
TWNKQ96RR1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
TWNKQ96RR1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TWNKQ96RR1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TWNKQ96RR1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TWNKQ96RR1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.45■■□□□ 1.5
TWNKQ96RR1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.45■■□□□ 1.5
TWNKQ96RR1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.45■■□□□ 1.5
TWNKQ96RR1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.45■■□□□ 1.5
TWNKQ96RR1 AC093323.1-202ENST00000635031 2045 ntBASIC24.45■■□□□ 1.5
TWNKQ96RR1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TWNKQ96RR1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TWNKQ96RR1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TWNKQ96RR1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
TWNKQ96RR1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TWNKQ96RR1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TWNKQ96RR1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.44■■□□□ 1.5
TWNKQ96RR1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
TWNKQ96RR1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TWNKQ96RR1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.43■■□□□ 1.5
TWNKQ96RR1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.43■■□□□ 1.5
TWNKQ96RR1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
TWNKQ96RR1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.43■■□□□ 1.5
TWNKQ96RR1 AL161729.1-201ENST00000604104 1402 ntBASIC24.43■■□□□ 1.5
TWNKQ96RR1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TWNKQ96RR1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TWNKQ96RR1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.42■■□□□ 1.5
TWNKQ96RR1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TWNKQ96RR1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
TWNKQ96RR1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.42■■□□□ 1.5
TWNKQ96RR1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
TWNKQ96RR1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.42■■□□□ 1.5
TWNKQ96RR1 MTDHP2-201ENST00000601468 714 ntBASIC24.42■■□□□ 1.5
TWNKQ96RR1 AC010997.5-201ENST00000609182 354 ntBASIC24.42■■□□□ 1.5
TWNKQ96RR1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.42■■□□□ 1.5
TWNKQ96RR1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TWNKQ96RR1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TWNKQ96RR1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
TWNKQ96RR1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
TWNKQ96RR1 AL356441.2-201ENST00000443009 864 ntBASIC24.41■■□□□ 1.5
TWNKQ96RR1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
TWNKQ96RR1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms