Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A9Q8NBW4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC38A9Q8NBW4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SLC38A9Q8NBW4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A9Q8NBW4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC38A9Q8NBW4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A9Q8NBW4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A9Q8NBW4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SLC38A9Q8NBW4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A9Q8NBW4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC38A9Q8NBW4 AC005703.6-201ENST00000623265 1329 ntBASIC21.78■■□□□ 1.08
SLC38A9Q8NBW4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC38A9Q8NBW4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.77■■□□□ 1.07
SLC38A9Q8NBW4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC38A9Q8NBW4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A9Q8NBW4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A9Q8NBW4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A9Q8NBW4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A9Q8NBW4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC38A9Q8NBW4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 AC005837.3-201ENST00000612163 286 ntBASIC21.75■■□□□ 1.07
SLC38A9Q8NBW4 HLA-L-211ENST00000482052 1765 ntBASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 AL022069.1-201ENST00000568025 1636 ntBASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC38A9Q8NBW4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A9Q8NBW4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 AC022211.4-201ENST00000625094 2161 ntBASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A9Q8NBW4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 UNC93B3-201ENST00000308076 687 ntBASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC38A9Q8NBW4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 PBX2P1-201ENST00000493219 1291 ntBASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 AC133561.4-201ENST00000566112 224 ntBASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 AC106739.1-201ENST00000617035 715 ntBASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A9Q8NBW4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC38A9Q8NBW4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A9Q8NBW4 MIR935-201ENST00000401179 91 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms