Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CPSF7Q8N684 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.42■■□□□ 1.18
CPSF7Q8N684 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 DUX4L9-201ENST00000449051 1259 ntBASIC22.41■■□□□ 1.18
CPSF7Q8N684 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CPSF7Q8N684 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CPSF7Q8N684 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPSF7Q8N684 AL117328.2-201ENST00000624617 1940 ntBASIC22.4■■□□□ 1.18
CPSF7Q8N684 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CPSF7Q8N684 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.4■■□□□ 1.18
CPSF7Q8N684 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.4■■□□□ 1.18
CPSF7Q8N684 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.4■■□□□ 1.18
CPSF7Q8N684 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.4■■□□□ 1.18
CPSF7Q8N684 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPSF7Q8N684 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPSF7Q8N684 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPSF7Q8N684 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CPSF7Q8N684 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.4■■□□□ 1.18
CPSF7Q8N684 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CPSF7Q8N684 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CPSF7Q8N684 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.17
CPSF7Q8N684 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
CPSF7Q8N684 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.39■■□□□ 1.17
CPSF7Q8N684 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
CPSF7Q8N684 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPSF7Q8N684 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPSF7Q8N684 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.38■■□□□ 1.17
CPSF7Q8N684 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPSF7Q8N684 CLDN5-201ENST00000403084 2357 ntBASIC22.38■■□□□ 1.17
CPSF7Q8N684 SPCS2P3-201ENST00000500401 656 ntBASIC22.38■■□□□ 1.17
CPSF7Q8N684 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.38■■□□□ 1.17
CPSF7Q8N684 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPSF7Q8N684 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.38■■□□□ 1.17
CPSF7Q8N684 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.37■■□□□ 1.17
CPSF7Q8N684 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPSF7Q8N684 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPSF7Q8N684 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPSF7Q8N684 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CPSF7Q8N684 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
CPSF7Q8N684 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.37■■□□□ 1.17
CPSF7Q8N684 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.37■■□□□ 1.17
CPSF7Q8N684 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.37■■□□□ 1.17
CPSF7Q8N684 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPSF7Q8N684 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CPSF7Q8N684 RARRES2P1-201ENST00000474487 481 ntBASIC22.36■■□□□ 1.17
CPSF7Q8N684 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPSF7Q8N684 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPSF7Q8N684 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPSF7Q8N684 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPSF7Q8N684 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CPSF7Q8N684 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPSF7Q8N684 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPSF7Q8N684 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CPSF7Q8N684 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CPSF7Q8N684 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
CPSF7Q8N684 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPSF7Q8N684 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.34■■□□□ 1.17
CPSF7Q8N684 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CPSF7Q8N684 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CPSF7Q8N684 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPSF7Q8N684 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 FOXO3B-201ENST00000395675 1928 ntBASIC22.33■■□□□ 1.17
CPSF7Q8N684 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.33■■□□□ 1.17
CPSF7Q8N684 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
CPSF7Q8N684 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
CPSF7Q8N684 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CPSF7Q8N684 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CPSF7Q8N684 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPSF7Q8N684 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms